FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0024277 through 18771 annotations produced 1 hits

trio (trio):

Annotation Number : CG18214
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024277
Gbrowse : chr3L:995977-1034875 (-) // 100.0 //
Probeset : 1635047_s_at
Accessions : protein= NP_651960; /// NP_728560; /// NP_728561; /// NP_728562; /// NP_728563; /// NP_995950;, nucleotide= NM_143703; /// NM_167847; /// NM_167848; /// NM_167849; /// NM_167850; /// NM_206228;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct a
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-n
FlyMine data for FBgn0024277.
Homophila reports that CG18214 is a close match (3e-12) to human gene ARHGEF6;COOL2;MRX46 (NP_004831), a gene associated with Mental retardation, X-linked nonspecific, type 46, 300436 (3).
BioGrid reports that CG18214 interacts with CG4032 CG10443 CG10443 CG10443 CG10443 CG15112 CG3936 CG2248 CG2248 CG2248 CG2248 CG2248 CG2248 CG3727 CG10295 CG8556 CG4609 CG5588 CG5588 CG17245 .
TRiP has 1 RNAi stocks for FBgn0024277 available for purchase.
VDRC has 2 RNAi stocks for FBgn0024277 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1639 ± 30	4 of 4	45.80	Up
Head	292 ± 24	4 of 4	8.20	Up
Eye	274 ± 23	4 of 4	7.66	Up
Thoracicoabdominal ganglion	984 ± 32	4 of 4	27.50	Up
Salivary gland	7 ± 3	0 of 4	0.21	Down
Crop	25 ± 1	2 of 4	0.70	Down
Midgut	28 ± 1	4 of 4	0.80	None
Tubule	18 ± 0	0 of 4	0.50	Down
Hindgut	19 ± 1	2 of 4	0.50	Down
Heart	6 ± 1	0 of 4	0.17	Down
Fat body	1 ± 1	0 of 4	0.05	Down
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	2 ± 1	0 of 4	0.10	Down
Virgin spermatheca	9 ± 0	0 of 4	0.27	Down
Mated spermatheca	6 ± 2	0 of 4	0.17	Down
Adult carcass	23 ± 4	0 of 4	0.70	None
Larval CNS	539 ± 24	4 of 4	15.06	Up
Larval Salivary gland	49 ± 1	4 of 4	1.38	Up
Larval midgut	33 ± 1	4 of 4	0.92	None
Larval tubule	13 ± 1	0 of 4	0.40	Down
Larval hindgut	14 ± 1	3 of 4	0.41	Down
Larval fat body	1 ± 0	0 of 4	0.00	Down
Larval trachea	11 ± 7	3 of 4	0.32	Down
Larval carcass	22 ± 1	2 of 4	0.64	Down
S2 cells (growing)	85 ± 5	4 of 4	2.38	Up
Whole fly	35 ± 2	4 of 4

Looking for FBgn0024277. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720