FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0024285 through 18771 annotations produced 1 hits

Srp54 (Srp54):

Annotation Number : CG4602
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024285
Gbrowse : chr2L:9912906-9915024 (+) // 100.0 //
Probeset : 1628382_at
Accessions : protein= NP_477347;, nucleotide= NM_057999;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
FlyMine data for FBgn0024285.
BDGP gene expression has embryonic in situ data for Srp54: 4 pix of staining in 1 body parts.
BioGrid reports that CG4602 interacts with CG4602 CG6843 .
TRiP has 1 RNAi stocks for FBgn0024285 available for purchase.
VDRC has 1 RNAi stocks for FBgn0024285 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	240 ± 9	4 of 4	1.00	None
Head	237 ± 18	4 of 4	0.90	None
Eye	393 ± 21	4 of 4	1.57	Up
Thoracicoabdominal ganglion	241 ± 7	4 of 4	1.00	None
Salivary gland	104 ± 8	4 of 4	0.42	Down
Crop	173 ± 1	4 of 4	0.70	Down
Midgut	158 ± 13	4 of 4	0.60	Down
Tubule	119 ± 3	4 of 4	0.50	Down
Hindgut	206 ± 5	4 of 4	0.80	Down
Heart	122 ± 7	4 of 4	0.49	Down
Fat body	181 ± 17	4 of 4	0.72	Down
Ovary	410 ± 4	4 of 4	1.60	Up
Testis	39 ± 3	4 of 4	0.20	Down
Male accessory glands	166 ± 13	4 of 4	0.70	Down
Virgin spermatheca	149 ± 8	4 of 4	0.59	Down
Mated spermatheca	154 ± 12	4 of 4	0.61	Down
Adult carcass	100 ± 5	4 of 4	0.40	Down
Larval CNS	578 ± 80	4 of 4	2.30	Up
Larval Salivary gland	284 ± 13	4 of 4	1.13	None
Larval midgut	200 ± 17	4 of 4	0.80	None
Larval tubule	246 ± 8	4 of 4	1.00	None
Larval hindgut	322 ± 15	4 of 4	1.28	Up
Larval fat body	115 ± 6	4 of 4	0.50	Down
Larval trachea	160 ± 10	4 of 4	0.64	Down
Larval carcass	201 ± 7	4 of 4	0.80	Down
S2 cells (growing)	566 ± 4	4 of 4	2.26	Up
Whole fly	251 ± 10	4 of 4

Looking for FBgn0024285. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720