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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024289 through 18771 annotations produced 1 hits



Sorbitol dehydrogenase like (Sodh-1):

Annotation Number : CG1982
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024289
Gbrowse : chr3R:2878056-2880264 (+) // 100.0 //
Probeset : 1639892_at
Accessions : protein= NP_477348;, nucleotide= NM_058000;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0003939 // L-iditol 2-dehydrogenase activity //
FlyMine data for FBgn0024289.
Homophila reports that CG1982 is a close match (2e-11) to human gene ADH1C;ADH3 (NP_000660), a gene associated with {Parkinson disease, susceptibility to}, 168600 (3).
TRiP has 1 RNAi stocks for FBgn0024289 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024289 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain41 ± 14 of 4 0.10Down
Head1390 ± 904 of 4 2.20Up
Eye450 ± 1134 of 4 0.72None
Thoracicoabdominal ganglion87 ± 134 of 4 0.10Down
Salivary gland27 ± 40 of 4 0.04Down
Crop42 ± 94 of 4 0.10Down
Midgut553 ± 564 of 4 0.90None
Tubule1630 ± 3034 of 4 2.60Up
Hindgut1191 ± 464 of 4 1.90Up
Heart2907 ± 3014 of 4 4.65Up
Fat body3551 ± 4314 of 4 5.68Up
Ovary2 ± 11 of 4 0.00Down
Testis16 ± 14 of 4 0.00Down
Male accessory glands14 ± 42 of 4 0.00Down
Virgin spermatheca3863 ± 1164 of 4 6.18Up
Mated spermatheca2496 ± 3574 of 4 3.99Up
Adult carcass3112 ± 894 of 4 5.00Up
Larval CNS5 ± 10 of 4 0.01Down
Larval Salivary gland12 ± 30 of 4 0.02Down
Larval midgut694 ± 654 of 4 1.11None
Larval tubule72 ± 134 of 4 0.10Down
Larval hindgut777 ± 624 of 4 1.24None
Larval fat body877 ± 1254 of 4 1.40None
Larval trachea20 ± 133 of 4 0.03Down
Larval carcass8 ± 21 of 4 0.01Down
S2 cells (growing)3 ± 10 of 4 0.01Down
Whole fly625 ± 564 of 4

Looking for FBgn0024289. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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