FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0024332 through 18771 annotations produced 1 hits

Minichromosome maintenance 3 (Mcm3):

Annotation Number : CG4206
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024332
Gbrowse : chrX:5217918-5220761 (+) // 100.0 //
Probeset : 1635234_at
Accessions : protein= NP_511048;, nucleotide= NM_078493;
Pathway : spreading of leading edge cells // inferred from mutant phenotype /// 0007405 // neuroblast proliferation // inferred f
Interpro : open tracheal system // traceable author statement /// 0035149 // lumen formation
FlyMine data for FBgn0024332.
BDGP gene expression has embryonic in situ data for Mcm3: 15 pix of staining in 11 body parts.
Homophila reports that CG4206 is a close match (2e-72) to human gene MCM6 (NP_005906), a gene associated with Lactase persistance/nonpersistance, 223100 (3);[Tall stature, susceptibility to], 606255 (3).
TRiP has 1 RNAi stocks for FBgn0024332 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024332 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 2	2 of 4	0.00	Down
Head	11 ± 2	0 of 4	0.00	Down
Eye	7 ± 0	0 of 4	0.03	Down
Thoracicoabdominal ganglion	10 ± 1	0 of 4	0.00	Down
Salivary gland	4 ± 0	0 of 4	0.01	Down
Crop	21 ± 3	1 of 4	0.10	Down
Midgut	29 ± 4	0 of 4	0.10	Down
Tubule	5 ± 1	0 of 4	0.00	Down
Hindgut	12 ± 1	1 of 4	0.00	Down
Heart	8 ± 0	0 of 4	0.03	Down
Fat body	11 ± 5	0 of 4	0.04	Down
Ovary	632 ± 20	4 of 4	2.30	Up
Testis	12 ± 0	3 of 4	0.00	Down
Male accessory glands	24 ± 3	0 of 4	0.10	Down
Virgin spermatheca	5 ± 2	0 of 4	0.02	Down
Mated spermatheca	9 ± 2	0 of 4	0.04	Down
Adult carcass	14 ± 7	1 of 4	0.10	Down
Larval CNS	407 ± 17	4 of 4	1.47	Up
Larval Salivary gland	163 ± 14	4 of 4	0.59	Down
Larval midgut	32 ± 3	0 of 4	0.12	Down
Larval tubule	19 ± 1	3 of 4	0.10	Down
Larval hindgut	53 ± 5	4 of 4	0.19	Down
Larval fat body	30 ± 5	0 of 4	0.10	Down
Larval trachea	135 ± 11	4 of 4	0.49	Down
Larval carcass	75 ± 8	4 of 4	0.27	Down
S2 cells (growing)	122 ± 3	4 of 4	0.44	Down
Whole fly	277 ± 10	4 of 4

Looking for FBgn0024332. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720