Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024364 through 18771 annotations produced 1 hits



(CG11417):

Annotation Number : CG11417
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024364
Gbrowse : chrX:1248075-1250513 (+) // 100.0 //
Probeset : 1637308_at
Accessions : protein= NP_569906;, nucleotide= NM_130550;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation
FlyMine data for FBgn0024364.
BDGP gene expression has embryonic in situ data for EG:8D8.4: 18 pix of staining in 20 body parts.
BioGrid reports that CG11417 interacts with CG8857 .
VDRC has 3 RNAi stocks for FBgn0024364 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain48 24 of 4 0.50Down
Head33 24 of 4 0.40Down
Eye32 14 of 4 0.36Down
Thoracicoabdominal ganglion44 34 of 4 0.50Down
Salivary gland55 44 of 4 0.61Down
Crop52 24 of 4 0.60Down
Midgut36 24 of 4 0.40Down
Tubule36 33 of 4 0.40Down
Hindgut44 44 of 4 0.50Down
Heart29 34 of 4 0.33Down
Fat body44 54 of 4 0.49Down
Ovary296 54 of 4 3.30Up
Testis25 24 of 4 0.30Down
Male accessory glands130 154 of 4 1.40None
Virgin spermatheca33 34 of 4 0.36Down
Mated spermatheca38 44 of 4 0.42Down
Adult carcass39 44 of 4 0.40Down
Larval CNS128 104 of 4 1.41Up
Larval Salivary gland73 74 of 4 0.81None
Larval midgut43 24 of 4 0.47Down
Larval tubule84 34 of 4 0.90None
Larval hindgut63 44 of 4 0.70Down
Larval fat body20 01 of 4 0.20Down
Larval trachea101 174 of 4 1.11None
Larval carcass48 64 of 4 0.53Down
S2 cells (growing)89 44 of 4 0.98None
Whole fly91 34 of 4

Looking for FBgn0024364. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime