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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024510 through 18771 annotations produced 1 hits



Vanaso (dlt):

Annotation Number : CG32315
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024510
Gbrowse : chr3L:1789624-1795318 (-) // 100.0 //
Probeset : 1633169_at
Accessions : protein= NP_728672;, nucleotide= NM_167916;
Pathway : actin assembly // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annota
Interpro : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0
FlyMine data for FBgn0024510.
BDGP gene expression has embryonic in situ data for Vanaso: 4 pix of staining in 1 body parts.
Homophila reports that CG32315 is a close match (2e-31) to human gene CDAN1;CDA1 (NP_612486), a gene associated with Anemia, congenital dyserythropoietic, type I, 224120 (3).
TRiP has 2 RNAi stocks for FBgn0024510 available for purchase.
VDRC has 6 RNAi stocks for FBgn0024510 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain39 ± 24 of 4 0.70Down
Head20 ± 24 of 4 0.40Down
Eye15 ± 04 of 4 0.28Down
Thoracicoabdominal ganglion34 ± 04 of 4 0.60Down
Salivary gland25 ± 32 of 4 0.45Down
Crop21 ± 43 of 4 0.40Down
Midgut24 ± 43 of 4 0.40Down
Tubule17 ± 02 of 4 0.30Down
Hindgut17 ± 14 of 4 0.30Down
Heart13 ± 01 of 4 0.24Down
Fat body23 ± 31 of 4 0.43Down
Ovary123 ± 24 of 4 2.20Up
Testis45 ± 14 of 4 0.80None
Male accessory glands16 ± 33 of 4 0.30Down
Virgin spermatheca24 ± 10 of 4 0.44Down
Mated spermatheca23 ± 10 of 4 0.43Down
Adult carcass16 ± 40 of 4 0.30Down
Larval CNS59 ± 44 of 4 1.07None
Larval Salivary gland28 ± 24 of 4 0.52Down
Larval midgut26 ± 24 of 4 0.48Down
Larval tubule12 ± 10 of 4 0.20Down
Larval hindgut24 ± 14 of 4 0.44Down
Larval fat body25 ± 33 of 4 0.50Down
Larval trachea21 ± 34 of 4 0.38Down
Larval carcass17 ± 04 of 4 0.31Down
S2 cells (growing)103 ± 34 of 4 1.87Up
Whole fly55 ± 34 of 4

Looking for FBgn0024510. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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