Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024542 through 18771 annotations produced 1 hits



Neosin (Neos):

Annotation Number : CG8614
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024542
Gbrowse : chr3L:7234937-7236239 (+) // 100.0 //
Probeset : 1632513_at
Accessions : protein= NP_523955;, nucleotide= NM_079231;
Pathway : via spliceosome // inferred by curator /// 0006412 // translation // inferred from electronic annotation /// 0055114 //
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay
FlyMine data for FBgn0024542.
BDGP gene expression has embryonic in situ data for Neos: 4 pix of staining in 1 body parts.
BioGrid reports that CG8614 interacts with CG9163 CG8614 CG9113 CG9173 CG9412 CG9415 CG9638 CG9914 .
VDRC has 3 RNAi stocks for FBgn0024542 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain122 34 of 4 0.90None
Head57 24 of 4 0.40Down
Eye66 54 of 4 0.48Down
Thoracicoabdominal ganglion94 14 of 4 0.70Down
Salivary gland48 82 of 4 0.35Down
Crop54 24 of 4 0.40Down
Midgut52 34 of 4 0.40Down
Tubule57 24 of 4 0.40Down
Hindgut49 24 of 4 0.40Down
Heart40 14 of 4 0.29Down
Fat body35 34 of 4 0.25Down
Ovary206 34 of 4 1.50Up
Testis360 64 of 4 2.60Up
Male accessory glands72 44 of 4 0.50Down
Virgin spermatheca37 24 of 4 0.27Down
Mated spermatheca41 24 of 4 0.30Down
Adult carcass41 14 of 4 0.30Down
Larval CNS201 154 of 4 1.45Up
Larval Salivary gland53 54 of 4 0.38Down
Larval midgut45 14 of 4 0.32Down
Larval tubule44 24 of 4 0.30Down
Larval hindgut48 24 of 4 0.35Down
Larval fat body81 204 of 4 0.60None
Larval trachea103 84 of 4 0.74Down
Larval carcass47 24 of 4 0.34Down
S2 cells (growing)60 14 of 4 0.44Down
Whole fly139 54 of 4

Looking for FBgn0024542. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime