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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024733 through 18771 annotations produced 1 hits



Ribosome RL10 (Qm):

Annotation Number : CG17521
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024733
Gbrowse : chr3L:23086729-23088574 (-) // 100.0 //
Probeset : 1623754_s_at
Accessions : protein= NP_651954; /// NP_730773;, nucleotide= NM_143697; /// NM_168984;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0024733.
BDGP gene expression has embryonic in situ data for Qm: 4 pix of staining in 1 body parts.
BioGrid reports that CG17521 interacts with CG17945 CG18217 CG3004 CG32654 CG6844 CG7546 CG7987 CG8187 CG9285 .
TRiP has 1 RNAi stocks for FBgn0024733 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024733 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3019 ± 904 of 4 0.70Down
Head4683 ± 2224 of 4 1.10None
Eye6083 ± 1614 of 4 1.45Up
Thoracicoabdominal ganglion4195 ± 1284 of 4 1.00None
Salivary gland12066 ± 3034 of 4 2.87Up
Crop6206 ± 3674 of 4 1.50Up
Midgut5590 ± 1124 of 4 1.30Up
Tubule6106 ± 1044 of 4 1.50Up
Hindgut5092 ± 1034 of 4 1.20Up
Heart6498 ± 4274 of 4 1.54Up
Fat body5674 ± 8324 of 4 1.35Up
Ovary3549 ± 654 of 4 0.80None
Testis1593 ± 234 of 4 0.40Down
Male accessory glands9504 ± 2704 of 4 2.30Up
Virgin spermatheca5620 ± 2074 of 4 1.34Up
Mated spermatheca5823 ± 1884 of 4 1.38Up
Adult carcass6059 ± 3314 of 4 1.40Up
Larval CNS2687 ± 2024 of 4 0.64Down
Larval Salivary gland7918 ± 3984 of 4 1.88Up
Larval midgut5008 ± 1224 of 4 1.19None
Larval tubule5269 ± 774 of 4 1.30Up
Larval hindgut4514 ± 604 of 4 1.07None
Larval fat body8296 ± 9164 of 4 2.00Up
Larval trachea6145 ± 2654 of 4 1.46Up
Larval carcass4821 ± 4104 of 4 1.15None
S2 cells (growing)4264 ± 864 of 4 1.01None
Whole fly4207 ± 2884 of 4

Looking for FBgn0024733. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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