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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024806 through 18771 annotations produced 1 hits



DISCO Interacting Protein 2 (DIP2):

Annotation Number : CG7020
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024806
Gbrowse : chr3L:250228-257950 (-) // 100.0 //
Probeset : 1634461_at
Accessions : protein= NP_612019;, nucleotide= NM_138175;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0024806.
Homophila reports that CG7020 is a close match (0) to human gene DIP2B;KIAA1463 (NP_775873), a gene associated with Mental retardation, FRA12A type, 136630 (3).
TRiP has 1 RNAi stocks for FBgn0024806 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024806 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain421 134 of 4 3.30Up
Head138 74 of 4 1.10None
Eye252 174 of 4 1.95Up
Thoracicoabdominal ganglion304 84 of 4 2.40Up
Salivary gland232 114 of 4 1.79Up
Crop133 24 of 4 1.00None
Midgut144 74 of 4 1.10None
Tubule229 34 of 4 1.80Up
Hindgut149 14 of 4 1.20None
Heart101 44 of 4 0.78Down
Fat body94 44 of 4 0.73Down
Ovary276 74 of 4 2.10Up
Testis264 74 of 4 2.00Up
Male accessory glands218 34 of 4 1.70Up
Virgin spermatheca117 54 of 4 0.91None
Mated spermatheca110 14 of 4 0.86None
Adult carcass84 54 of 4 0.70Down
Larval CNS464 254 of 4 3.59Up
Larval Salivary gland225 74 of 4 1.74Up
Larval midgut240 194 of 4 1.86Up
Larval tubule257 94 of 4 2.00Up
Larval hindgut207 134 of 4 1.60Up
Larval fat body162 94 of 4 1.30Up
Larval trachea184 94 of 4 1.42Up
Larval carcass130 104 of 4 1.01None
S2 cells (growing)212 54 of 4 1.64Up
Whole fly129 94 of 4

Looking for FBgn0024806. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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