FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0024889 through 18771 annotations produced 1 hits

karyopherin-alpha1 (Kap-alpha1):

Annotation Number : CG8548
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024889
Gbrowse : chr3L:19800346-19803498 (+) // 100.0 //
Probeset : 1629920_at
Accessions : protein= NP_524167;, nucleotide= NM_079443;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from sequence or struc
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0024889.
BDGP gene expression has embryonic in situ data for Kap-alpha1: 4 pix of staining in 1 body parts.
BioGrid reports that CG8548 interacts with CG4799 .
TRiP has 1 RNAi stocks for FBgn0024889 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024889 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	457 ± 2	4 of 4	1.50	Up
Head	360 ± 13	4 of 4	1.20	Up
Eye	557 ± 50	4 of 4	1.81	Up
Thoracicoabdominal ganglion	403 ± 4	4 of 4	1.30	Up
Salivary gland	396 ± 9	4 of 4	1.29	Up
Crop	363 ± 17	4 of 4	1.20	Up
Midgut	129 ± 10	4 of 4	0.40	Down
Tubule	315 ± 10	4 of 4	1.00	None
Hindgut	336 ± 10	4 of 4	1.10	None
Heart	324 ± 5	4 of 4	1.05	None
Fat body	411 ± 57	4 of 4	1.34	Up
Ovary	585 ± 7	4 of 4	1.90	Up
Testis	632 ± 16	4 of 4	2.10	Up
Male accessory glands	269 ± 9	4 of 4	0.90	Down
Virgin spermatheca	329 ± 12	4 of 4	1.07	None
Mated spermatheca	398 ± 18	4 of 4	1.30	Up
Adult carcass	354 ± 9	4 of 4	1.20	Up
Larval CNS	288 ± 5	4 of 4	0.94	None
Larval Salivary gland	315 ± 3	4 of 4	1.03	None
Larval midgut	141 ± 8	4 of 4	0.46	Down
Larval tubule	205 ± 5	4 of 4	0.70	Down
Larval hindgut	295 ± 10	4 of 4	0.96	None
Larval fat body	272 ± 59	4 of 4	0.90	None
Larval trachea	321 ± 16	4 of 4	1.04	None
Larval carcass	262 ± 23	4 of 4	0.85	None
S2 cells (growing)	210 ± 5	4 of 4	0.68	Down
Whole fly	307 ± 8	4 of 4

Looking for FBgn0024889. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720