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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024947 through 18771 annotations produced 1 hits



CD39-like NTPase (NTPase):

Annotation Number : CG3059
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024947
Gbrowse : chr2L:2880712-2885850 (-) // 100.0 //
Probeset : 1630857_s_at
Accessions : protein= NP_477370; /// NP_722860; /// NP_722861; /// NP_722862;, nucleotide= NM_058022; /// NM_164513; /// NM_164514; /// NM_164515;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004382 // guanosine-diphosphatase activity // inferred from direct assay /// 0004382 // guanosine-diphosphatase activit
FlyMine data for FBgn0024947.
BDGP gene expression has embryonic in situ data for NTPase: 13 pix of staining in 5 body parts.
VDRC has 2 RNAi stocks for FBgn0024947 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1173 ± 244 of 4 1.40Up
Head1270 ± 124 of 4 1.50Up
Eye1543 ± 334 of 4 1.85Up
Thoracicoabdominal ganglion1694 ± 214 of 4 2.00Up
Salivary gland4275 ± 1074 of 4 5.13Up
Crop1562 ± 574 of 4 1.90Up
Midgut2368 ± 394 of 4 2.80Up
Tubule3422 ± 1444 of 4 4.10Up
Hindgut1188 ± 104 of 4 1.40Up
Heart1077 ± 204 of 4 1.29Up
Fat body1455 ± 854 of 4 1.75Up
Ovary929 ± 134 of 4 1.10None
Testis233 ± 64 of 4 0.30Down
Male accessory glands2723 ± 514 of 4 3.30Up
Virgin spermatheca1489 ± 384 of 4 1.79Up
Mated spermatheca1565 ± 314 of 4 1.88Up
Adult carcass1377 ± 324 of 4 1.70Up
Larval CNS590 ± 284 of 4 0.71Down
Larval Salivary gland6024 ± 2424 of 4 7.24Up
Larval midgut3233 ± 704 of 4 3.88Up
Larval tubule2863 ± 304 of 4 3.40Up
Larval hindgut1012 ± 184 of 4 1.22Up
Larval fat body1603 ± 1264 of 4 1.90Up
Larval trachea886 ± 364 of 4 1.07None
Larval carcass687 ± 394 of 4 0.83Down
S2 cells (growing)1694 ± 174 of 4 2.03Up
Whole fly832 ± 394 of 4

Looking for FBgn0024947. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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