Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024956 through 18771 annotations produced 1 hits



Mat1 (Mat1):

Annotation Number : CG7614
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024956
Gbrowse : chr2R:6626121-6627339 (-) // 100.0 //
Probeset : 1634055_at
Accessions : protein= NP_610605;, nucleotide= NM_136761;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005675 // holo TFIIH complex // inferred from sequence or
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0024956.
BDGP gene expression has embryonic in situ data for Mat1: 4 pix of staining in 1 body parts.
BioGrid reports that CG7614 interacts with CG9046 CG11100 CG12723 CG15112 CG11486 CG4184 CG1765 CG11206 CG33109 .
VDRC has 2 RNAi stocks for FBgn0024956 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain232 ± 24 of 4 1.10None
Head131 ± 24 of 4 0.60Down
Eye109 ± 54 of 4 0.52Down
Thoracicoabdominal ganglion277 ± 114 of 4 1.30Up
Salivary gland128 ± 54 of 4 0.60Down
Crop133 ± 54 of 4 0.60Down
Midgut120 ± 34 of 4 0.60Down
Tubule87 ± 54 of 4 0.40Down
Hindgut152 ± 44 of 4 0.70Down
Heart128 ± 144 of 4 0.60Down
Fat body119 ± 124 of 4 0.56Down
Ovary354 ± 44 of 4 1.70Up
Testis106 ± 34 of 4 0.50Down
Male accessory glands194 ± 124 of 4 0.90None
Virgin spermatheca144 ± 64 of 4 0.68Down
Mated spermatheca176 ± 34 of 4 0.83None
Adult carcass120 ± 74 of 4 0.60Down
Larval CNS264 ± 164 of 4 1.24None
Larval Salivary gland115 ± 54 of 4 0.54Down
Larval midgut105 ± 34 of 4 0.50Down
Larval tubule69 ± 34 of 4 0.30Down
Larval hindgut120 ± 54 of 4 0.57Down
Larval fat body198 ± 114 of 4 0.90None
Larval trachea225 ± 134 of 4 1.06None
Larval carcass105 ± 24 of 4 0.50Down
S2 cells (growing)236 ± 104 of 4 1.11None
Whole fly212 ± 194 of 4

Looking for FBgn0024956. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime