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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024986 through 18771 annotations produced 1 hits



thioredoxin (CG3719):

Annotation Number : CG3719
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024986
Gbrowse : chrX:1272740-1274509 (-) // 100.0 //
Probeset : 1632803_at
Accessions : protein= NP_651990;, nucleotide= NM_143733;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity
Interpro : 0015036 // disulfide oxidoreductase activity // inferred from sequence or structural similarity
FlyMine data for FBgn0024986.
VDRC has 2 RNAi stocks for FBgn0024986 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain107 134 of 4 1.20None
Head109 114 of 4 1.30None
Eye243 64 of 4 2.79Up
Thoracicoabdominal ganglion174 144 of 4 2.00Up
Salivary gland186 94 of 4 2.14Up
Crop302 94 of 4 3.50Up
Midgut232 54 of 4 2.70Up
Tubule187 84 of 4 2.20Up
Hindgut156 24 of 4 1.80Up
Heart214 134 of 4 2.46Up
Fat body94 134 of 4 1.08None
Ovary98 44 of 4 1.10None
Testis20 14 of 4 0.20Down
Male accessory glands120 104 of 4 1.40None
Virgin spermatheca113 64 of 4 1.30None
Mated spermatheca109 64 of 4 1.25None
Adult carcass148 74 of 4 1.70Up
Larval CNS119 154 of 4 1.37None
Larval Salivary gland176 104 of 4 2.02Up
Larval midgut200 154 of 4 2.30Up
Larval tubule131 84 of 4 1.50Up
Larval hindgut160 54 of 4 1.84Up
Larval fat body61 94 of 4 0.70None
Larval trachea172 204 of 4 1.98Up
Larval carcass120 154 of 4 1.38None
S2 cells (growing)94 44 of 4 1.09None
Whole fly87 104 of 4

Looking for FBgn0024986. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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