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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024995 through 18771 annotations produced 1 hits



(CG2680):

Annotation Number : CG2680
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024995
Gbrowse : chrX:2600191-2601468 (-) // 100.0 //
Probeset : 1630821_at
Accessions : protein= NP_570021;, nucleotide= NM_130665;
Interpro : 0003869 // 4-nitrophenylphosphatase activity // inferred from direct assay /// 0003869 // 4-nitrophenylphosphatase activ
FlyMine data for FBgn0024995.
VDRC has 2 RNAi stocks for FBgn0024995 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain318 ± 44 of 4 2.90Up
Head74 ± 34 of 4 0.70Down
Eye62 ± 54 of 4 0.57Down
Thoracicoabdominal ganglion395 ± 54 of 4 3.60Up
Salivary gland1 ± 00 of 4 0.01Down
Crop1 ± 00 of 4 0.00Down
Midgut38 ± 54 of 4 0.30Down
Tubule3243 ± 724 of 429.50Up
Hindgut369 ± 104 of 4 3.40Up
Heart1 ± 00 of 4 0.02Down
Fat body1 ± 10 of 4 0.02Down
Ovary0 ± 00 of 4 0.00Down
Testis23 ± 24 of 4 0.20Down
Male accessory glands0 ± 00 of 4 0.00Down
Virgin spermatheca1 ± 10 of 4 0.02Down
Mated spermatheca1 ± 00 of 4 0.01Down
Adult carcass9 ± 30 of 4 0.10Down
Larval CNS116 ± 294 of 4 1.06None
Larval Salivary gland1 ± 00 of 4 0.02Down
Larval midgut1 ± 00 of 4 0.02Down
Larval tubule2100 ± 514 of 419.10Up
Larval hindgut9 ± 20 of 4 0.08Down
Larval fat body3 ± 00 of 4 0.00Down
Larval trachea0 ± 00 of 4 0.01Down
Larval carcass1 ± 00 of 4 0.01Down
S2 cells (growing)0 ± 00 of 4 0.01Down
Whole fly110 ± 84 of 4

Looking for FBgn0024995. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime