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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0025592 through 18771 annotations produced 1 hits



Glycerol kinase (Gyk):

Annotation Number : CG18374
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025592
Gbrowse : chr3L:202093-205819 (-) // 100.0 //
Probeset : 1638285_a_at
Accessions : protein= NP_524655; /// NP_728486;, nucleotide= NM_079916; /// NM_167803;
Interpro : "0004370 // glycerol kinase activity // inferred from electronic annotation /// 0004370 // glycerol kinase activity // n
FlyMine data for FBgn0025592.
BDGP gene expression has embryonic in situ data for Gyk: 13 pix of staining in 6 body parts.
Homophila reports that CG18374 is a close match (4e-139) to human gene GK (NP_976325), a gene associated with Glycerol kinase deficiency, 307030 (3).
TRiP has 1 RNAi stocks for FBgn0025592 available for purchase.
VDRC has 2 RNAi stocks for FBgn0025592 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain235 ± 64 of 4 0.90Down
Head550 ± 174 of 4 2.00Up
Eye305 ± 224 of 4 1.14None
Thoracicoabdominal ganglion242 ± 54 of 4 0.90Down
Salivary gland517 ± 164 of 4 1.92Up
Crop969 ± 314 of 4 3.60Up
Midgut685 ± 174 of 4 2.50Up
Tubule363 ± 184 of 4 1.40Up
Hindgut632 ± 84 of 4 2.40Up
Heart725 ± 504 of 4 2.70Up
Fat body1301 ± 624 of 4 4.84Up
Ovary110 ± 24 of 4 0.40Down
Testis112 ± 14 of 4 0.40Down
Male accessory glands571 ± 194 of 4 2.10Up
Virgin spermatheca1613 ± 864 of 4 5.99Up
Mated spermatheca1323 ± 884 of 4 4.92Up
Adult carcass751 ± 154 of 4 2.80Up
Larval CNS146 ± 54 of 4 0.54Down
Larval Salivary gland280 ± 94 of 4 1.04None
Larval midgut325 ± 294 of 4 1.21None
Larval tubule32 ± 14 of 4 0.10Down
Larval hindgut219 ± 94 of 4 0.82Down
Larval fat body188 ± 84 of 4 0.70Down
Larval trachea165 ± 64 of 4 0.62Down
Larval carcass159 ± 104 of 4 0.59Down
S2 cells (growing)262 ± 74 of 4 0.98None
Whole fly269 ± 64 of 4

Looking for FBgn0025592. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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