FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0025740 through 18771 annotations produced 3 hits

Plexin-B (plexB):

Annotation Number : CG32010
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025740 /// FBgn0052010 /// FBgn0052011
Gbrowse : chr4:40881-46839 (-) // 100.0 // /// chr4:54306-316333 (-) // 98.92 // /// chr4:27656-204332 (-) // 98.55 //
Probeset : 1640702_at
Accessions : protein= NP_524616;, nucleotide= NM_079877;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic anno
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from phys
FlyMine data for FBgn0025740 /// FBgn0052010 /// FBgn0052011.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 2	2 of 4	2.40	Up
Head	8 ± 2	2 of 4	1.60	None
Eye	5 ± 1	0 of 4	1.08	None
Thoracicoabdominal ganglion	8 ± 3	0 of 4	1.70	None
Salivary gland	17 ± 3	0 of 4	3.43	Up
Crop	13 ± 2	4 of 4	2.50	Up
Midgut	5 ± 2	0 of 4	1.00	None
Tubule	3 ± 1	0 of 4	0.70	None
Hindgut	12 ± 2	1 of 4	2.40	None
Heart	14 ± 1	4 of 4	2.73	Up
Fat body	28 ± 8	4 of 4	5.40	Up
Ovary	1 ± 1	0 of 4	0.30	None
Testis	2 ± 0	0 of 4	0.40	None
Male accessory glands	18 ± 5	2 of 4	3.50	None
Virgin spermatheca	8 ± 1	0 of 4	1.67	None
Mated spermatheca	11 ± 3	3 of 4	2.16	None
Adult carcass	17 ± 5	2 of 4	3.40	None
Larval CNS	15 ± 2	4 of 4	2.94	Up
Larval Salivary gland	8 ± 2	1 of 4	1.58	None
Larval midgut	1 ± 0	0 of 4	0.25	None
Larval tubule	9 ± 1	1 of 4	1.80	None
Larval hindgut	6 ± 1	2 of 4	1.32	None
Larval fat body	5 ± 1	0 of 4	1.10	None
Larval trachea	5 ± 1	1 of 4	1.05	None
Larval carcass	2 ± 1	0 of 4	0.48	None
S2 cells (growing)	3 ± 0	0 of 4	0.66	None
Whole fly	5 ± 1	2 of 4

Plexin-B (plexB):

Annotation Number : CG17245
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025740
Gbrowse : chr4:53433-64403 (-) // 100.0 // /// chr4:33565-45652 (-) // 66.68 // /// chr4:26784-32380 (-) // 65.98 // /// chr4:47945-52081 (-) // 44.4 //
Probeset : 1626676_at
Accessions : protein= NP_524616;, nucleotide= NM_079877;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic anno
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from phys
FlyMine data for FBgn0025740.
Homophila reports that CG17245 is a close match (3e-29) to human gene AUTS9;MET (NP_000236), a gene associated with Hepatocellular carcinoma, childhood type, 114550 (3);Renal cell carcinoma, papillary, familial and sporadic, 605074 (3);{Autism, suseptibility to, 9}, 611015 (3).
BioGrid reports that CG17245 interacts with CG7366 CG3427 CG2248 CG2248 CG10295 CG8416 CG18214 .
TRiP has 1 RNAi stocks for FBgn0025740 available for purchase.
VDRC has 8 RNAi stocks for FBgn0025740 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	353 ± 43	4 of 4	3.50	Up
Head	143 ± 12	4 of 4	1.40	None
Eye	126 ± 26	4 of 4	1.25	None
Thoracicoabdominal ganglion	293 ± 25	4 of 4	2.90	Up
Salivary gland	210 ± 21	4 of 4	2.09	Up
Crop	150 ± 13	4 of 4	1.50	Up
Midgut	79 ± 2	4 of 4	0.80	None
Tubule	187 ± 2	4 of 4	1.90	Up
Hindgut	133 ± 10	4 of 4	1.30	None
Heart	98 ± 3	4 of 4	0.98	None
Fat body	109 ± 7	4 of 4	1.09	None
Ovary	185 ± 9	4 of 4	1.80	Up
Testis	66 ± 5	4 of 4	0.70	None
Male accessory glands	180 ± 13	4 of 4	1.80	Up
Virgin spermatheca	92 ± 12	4 of 4	0.92	None
Mated spermatheca	98 ± 6	4 of 4	0.98	None
Adult carcass	64 ± 2	4 of 4	0.60	None
Larval CNS	620 ± 68	4 of 4	6.15	Up
Larval Salivary gland	218 ± 14	4 of 4	2.17	Up
Larval midgut	121 ± 2	4 of 4	1.21	None
Larval tubule	323 ± 22	4 of 4	3.20	Up
Larval hindgut	210 ± 9	4 of 4	2.09	Up
Larval fat body	114 ± 7	4 of 4	1.10	None
Larval trachea	212 ± 24	4 of 4	2.11	Up
Larval carcass	160 ± 9	4 of 4	1.59	Up
S2 cells (growing)	195 ± 16	4 of 4	1.94	Up
Whole fly	100 ± 14	4 of 4

Plexin-B (plexB):

Annotation Number : CG32010
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025740 /// FBgn0052009 /// FBgn0052010
Gbrowse : chr4:40881-46839 (-) // 100.0 // /// chr4:54306-316333 (-) // 98.92 // /// chr4:27656-204332 (-) // 98.55 //
Probeset : 1623432_s_at
Accessions : protein= NP_524616;, nucleotide= NM_079877;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic anno
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from phys
FlyMine data for FBgn0025740 /// FBgn0052009 /// FBgn0052010.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	145 ± 3	4 of 4	4.50	Up
Head	52 ± 2	4 of 4	1.60	Up
Eye	31 ± 3	4 of 4	0.99	None
Thoracicoabdominal ganglion	104 ± 9	4 of 4	3.20	Up
Salivary gland	74 ± 3	4 of 4	2.30	Up
Crop	50 ± 1	4 of 4	1.60	Up
Midgut	22 ± 1	4 of 4	0.70	None
Tubule	44 ± 1	4 of 4	1.40	Up
Hindgut	49 ± 4	4 of 4	1.50	Up
Heart	23 ± 2	4 of 4	0.75	None
Fat body	39 ± 11	4 of 4	1.23	None
Ovary	66 ± 5	4 of 4	2.10	Up
Testis	26 ± 2	4 of 4	0.80	None
Male accessory glands	83 ± 2	4 of 4	2.60	Up
Virgin spermatheca	15 ± 0	4 of 4	0.47	Down
Mated spermatheca	13 ± 1	4 of 4	0.40	Down
Adult carcass	32 ± 4	4 of 4	1.00	None
Larval CNS	248 ± 17	4 of 4	7.73	Up
Larval Salivary gland	103 ± 9	4 of 4	3.22	Up
Larval midgut	28 ± 0	4 of 4	0.90	None
Larval tubule	143 ± 6	4 of 4	4.50	Up
Larval hindgut	77 ± 5	4 of 4	2.41	Up
Larval fat body	53 ± 4	4 of 4	1.70	Up
Larval trachea	60 ± 8	4 of 4	1.88	Up
Larval carcass	48 ± 5	4 of 4	1.50	Up
S2 cells (growing)	162 ± 9	4 of 4	5.06	Up
Whole fly	32 ± 3	4 of 4

Looking for FBgn0025740. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720