Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0025821 through 18771 annotations produced 1 hits


Inhibitor-t (I-t):

Annotation Number : CG14719
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025821
Gbrowse : chr3R:7529345-7530662 (+) // 100.0 //
Probeset : 1629316_at
Accessions : protein= NP_524323;, nucleotide= NM_079599;
Interpro : 0004864 // phosphoprotein phosphatase inhibitor activity // inferred from direct assay /// 0004864 // phosphoprotein pho
FlyMine data for FBgn0025821.
BioGrid reports that CG14719 interacts with CG31457 CG5650 .
VDRC has 3 RNAi stocks for FBgn0025821 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 10 of 4 0.00Down
Head2 ± 10 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland3 ± 10 of 4 0.06Down
Crop0 ± 00 of 4 0.00Down
Midgut3 ± 10 of 4 0.10Down
Tubule2 ± 00 of 4 0.00Down
Hindgut0 ± 00 of 4 0.00Down
Heart1 ± 00 of 4 0.03Down
Fat body5 ± 30 of 4 0.09Down
Ovary0 ± 00 of 4 0.00Down
Testis819 ± 164 of 414.00Up
Male accessory glands7 ± 20 of 4 0.10Down
Virgin spermatheca0 ± 00 of 4 0.01Down
Mated spermatheca1 ± 00 of 4 0.02Down
Adult carcass3 ± 20 of 4 0.10Down
Larval CNS0 ± 10 of 4 0.02Down
Larval Salivary gland0 ± 00 of 4 0.01Down
Larval midgut4 ± 10 of 4 0.08Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut0 ± 00 of 4 0.01Down
Larval fat body143 ± 824 of 4 2.40None
Larval trachea6 ± 61 of 4 0.10Down
Larval carcass0 ± 00 of 4 0.01Down
S2 cells (growing)1 ± 00 of 4 0.02Down
Whole fly58 ± 64 of 4

Looking for FBgn0025821. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime