FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0026084 through 18771 annotations produced 2 hits

ciboulot (cib):

Annotation Number : CG4944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026084
Gbrowse : chrX:4000867-4005014 (+) // 100.0 //
Probeset : 1624931_at
Accessions : protein= NP_525065; /// NP_726908; /// NP_726909;, nucleotide= NM_080326; /// NM_167001; /// NM_167002;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred fro
FlyMine data for FBgn0026084.
BDGP gene expression has embryonic in situ data for cib: 35 pix of staining in 26 body parts.
BioGrid reports that CG4944 interacts with CG9121 CG9553 .
TRiP has 2 RNAi stocks for FBgn0026084 available for purchase.
VDRC has 1 RNAi stocks for FBgn0026084 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	667 ± 41	4 of 4	0.80	Down
Head	458 ± 33	4 of 4	0.50	Down
Eye	315 ± 35	4 of 4	0.37	Down
Thoracicoabdominal ganglion	483 ± 9	4 of 4	0.60	Down
Salivary gland	116 ± 7	4 of 4	0.14	Down
Crop	671 ± 36	4 of 4	0.80	Down
Midgut	1739 ± 79	4 of 4	2.00	Up
Tubule	54 ± 6	4 of 4	0.10	Down
Hindgut	534 ± 38	4 of 4	0.60	Down
Heart	325 ± 57	4 of 4	0.38	Down
Fat body	128 ± 16	4 of 4	0.15	Down
Ovary	1317 ± 16	4 of 4	1.50	Up
Testis	990 ± 38	4 of 4	1.20	None
Male accessory glands	717 ± 114	4 of 4	0.80	None
Virgin spermatheca	218 ± 34	4 of 4	0.25	Down
Mated spermatheca	331 ± 31	4 of 4	0.39	Down
Adult carcass	237 ± 26	4 of 4	0.30	Down
Larval CNS	2579 ± 286	4 of 4	3.02	Up
Larval Salivary gland	3256 ± 390	4 of 4	3.81	Up
Larval midgut	4985 ± 155	4 of 4	5.83	Up
Larval tubule	1586 ± 149	4 of 4	1.90	Up
Larval hindgut	2239 ± 97	4 of 4	2.62	Up
Larval fat body	1632 ± 228	4 of 4	1.90	Up
Larval trachea	3266 ± 719	4 of 4	3.82	Up
Larval carcass	1777 ± 68	4 of 4	2.08	Up
S2 cells (growing)	28 ± 2	4 of 4	0.03	Down
Whole fly	854 ± 55	4 of 4

ciboulot (cib):

Annotation Number : CG4944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026084
Gbrowse : chrX:4000147-4004670 (+) // 100.0 //
Probeset : 1632105_a_at
Accessions : protein= NP_525065; /// NP_726908; /// NP_726909;, nucleotide= NM_080326; /// NM_167001; /// NM_167002;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred fro
FlyMine data for FBgn0026084.
BDGP gene expression has embryonic in situ data for cib: 35 pix of staining in 26 body parts.
BioGrid reports that CG4944 interacts with CG9121 CG9553 .
TRiP has 2 RNAi stocks for FBgn0026084 available for purchase.
VDRC has 1 RNAi stocks for FBgn0026084 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	499 ± 14	4 of 4	0.40	Down
Head	354 ± 71	4 of 4	0.30	Down
Eye	598 ± 3	4 of 4	0.53	Down
Thoracicoabdominal ganglion	254 ± 17	4 of 4	0.20	Down
Salivary gland	199 ± 12	4 of 4	0.18	Down
Crop	332 ± 28	4 of 4	0.30	Down
Midgut	1780 ± 54	4 of 4	1.60	Up
Tubule	51 ± 4	4 of 4	0.00	Down
Hindgut	493 ± 20	4 of 4	0.40	Down
Heart	402 ± 22	4 of 4	0.35	Down
Fat body	85 ± 12	4 of 4	0.08	Down
Ovary	1485 ± 45	4 of 4	1.30	None
Testis	570 ± 12	4 of 4	0.50	Down
Male accessory glands	351 ± 54	4 of 4	0.30	Down
Virgin spermatheca	77 ± 2	4 of 4	0.07	Down
Mated spermatheca	90 ± 15	4 of 4	0.08	Down
Adult carcass	204 ± 20	4 of 4	0.20	Down
Larval CNS	2112 ± 130	4 of 4	1.86	Up
Larval Salivary gland	2141 ± 61	4 of 4	1.89	Up
Larval midgut	3129 ± 128	4 of 4	2.76	Up
Larval tubule	1168 ± 114	4 of 4	1.00	None
Larval hindgut	1094 ± 76	4 of 4	0.96	None
Larval fat body	1270 ± 212	4 of 4	1.10	None
Larval trachea	4011 ± 149	4 of 4	3.54	Up
Larval carcass	1358 ± 90	4 of 4	1.20	None
S2 cells (growing)	737 ± 7	4 of 4	0.65	None
Whole fly	1134 ± 127	4 of 4

Looking for FBgn0026084. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720