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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0026088 through 18771 annotations produced 1 hits


Annotation Number : CG14818
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026088
Gbrowse : chrX:1773043-1773615 (-) // 100.0 //
Probeset : 1626544_at
Accessions : protein= NP_569955;, nucleotide= NM_130599;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0026088.
BioGrid reports that CG14818 interacts with CG15124 CG15468 CG33141 CG7371 CG9749 CG9951 CG15631 CG2275 CG33484 CG5478 CG5516 CG6156 CG7357 CG7490 CG7891 CG8801 .
VDRC has 2 RNAi stocks for FBgn0026088 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain661 94 of 4 2.00Up
Head644 244 of 4 1.90Up
Eye1131 374 of 4 3.37Up
Thoracicoabdominal ganglion627 324 of 4 1.90Up
Salivary gland2757 3904 of 4 8.22Up
Crop542 184 of 4 1.60Up
Midgut1024 264 of 4 3.10Up
Tubule652 204 of 4 1.90Up
Hindgut1248 264 of 4 3.70Up
Heart464 64 of 4 1.38Up
Fat body297 234 of 4 0.89None
Ovary241 84 of 4 0.70Down
Testis162 74 of 4 0.50Down
Male accessory glands445 314 of 4 1.30Up
Virgin spermatheca268 14 of 4 0.80None
Mated spermatheca285 204 of 4 0.85None
Adult carcass478 144 of 4 1.40Up
Larval CNS425 494 of 4 1.27Up
Larval Salivary gland1414 614 of 4 4.21Up
Larval midgut1493 194 of 4 4.45Up
Larval tubule1729 744 of 4 5.20Up
Larval hindgut1714 314 of 4 5.11Up
Larval fat body585 514 of 4 1.70Up
Larval trachea739 754 of 4 2.20Up
Larval carcass900 694 of 4 2.68Up
S2 cells (growing)664 94 of 4 1.98Up
Whole fly335 214 of 4

Looking for FBgn0026088. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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