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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026089 through 18771 annotations produced 1 hits



(CG14817):

Annotation Number : CG14817
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026089
Gbrowse : chrX:1770713-1771256 (-) // 100.0 //
Probeset : 1631733_at
Accessions : protein= NP_569953;, nucleotide= NM_130597;
FlyMine data for FBgn0026089.
BioGrid reports that CG14817 interacts with CG17592 .
VDRC has 2 RNAi stocks for FBgn0026089 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain366 ± 74 of 4 1.20Up
Head378 ± 174 of 4 1.20Up
Eye393 ± 244 of 4 1.25Up
Thoracicoabdominal ganglion470 ± 264 of 4 1.50Up
Salivary gland223 ± 134 of 4 0.71Down
Crop389 ± 134 of 4 1.20Up
Midgut287 ± 94 of 4 0.90None
Tubule334 ± 24 of 4 1.10Up
Hindgut409 ± 154 of 4 1.30Up
Heart315 ± 64 of 4 1.00None
Fat body347 ± 234 of 4 1.10None
Ovary484 ± 144 of 4 1.50Up
Testis99 ± 54 of 4 0.30Down
Male accessory glands354 ± 34 of 4 1.10None
Virgin spermatheca347 ± 124 of 4 1.10None
Mated spermatheca387 ± 144 of 4 1.23Up
Adult carcass343 ± 164 of 4 1.10None
Larval CNS317 ± 104 of 4 1.00None
Larval Salivary gland380 ± 204 of 4 1.20Up
Larval midgut209 ± 194 of 4 0.66Down
Larval tubule356 ± 154 of 4 1.10None
Larval hindgut392 ± 104 of 4 1.24Up
Larval fat body229 ± 144 of 4 0.70Down
Larval trachea283 ± 264 of 4 0.90None
Larval carcass257 ± 114 of 4 0.81Down
S2 cells (growing)370 ± 34 of 4 1.17Up
Whole fly316 ± 144 of 4

Looking for FBgn0026089. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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