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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026090 through 18771 annotations produced 1 hits



(CG14812):

Annotation Number : CG14812
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026090
Gbrowse : chrX:1752002-1752984 (-) // 100.0 //
Probeset : 1632389_at
Accessions : protein= NP_569946;, nucleotide= NM_130590;
FlyMine data for FBgn0026090.
BioGrid reports that CG14812 interacts with CG16889 CG17777 .
VDRC has 2 RNAi stocks for FBgn0026090 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain327 ± 34 of 4 1.50Up
Head325 ± 84 of 4 1.50Up
Eye489 ± 174 of 4 2.28Up
Thoracicoabdominal ganglion404 ± 24 of 4 1.90Up
Salivary gland400 ± 254 of 4 1.87Up
Crop290 ± 124 of 4 1.40Up
Midgut376 ± 34 of 4 1.80Up
Tubule311 ± 284 of 4 1.50Up
Hindgut314 ± 64 of 4 1.50Up
Heart301 ± 84 of 4 1.41Up
Fat body325 ± 134 of 4 1.52Up
Ovary295 ± 74 of 4 1.40Up
Testis75 ± 24 of 4 0.40Down
Male accessory glands488 ± 134 of 4 2.30Up
Virgin spermatheca242 ± 34 of 4 1.13Up
Mated spermatheca207 ± 64 of 4 0.97None
Adult carcass316 ± 114 of 4 1.50Up
Larval CNS384 ± 184 of 4 1.79Up
Larval Salivary gland2509 ± 1114 of 411.69Up
Larval midgut504 ± 144 of 4 2.35Up
Larval tubule957 ± 274 of 4 4.50Up
Larval hindgut407 ± 134 of 4 1.90Up
Larval fat body503 ± 494 of 4 2.30Up
Larval trachea293 ± 444 of 4 1.37Up
Larval carcass377 ± 104 of 4 1.76Up
S2 cells (growing)976 ± 204 of 4 4.55Up
Whole fly214 ± 84 of 4

Looking for FBgn0026090. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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