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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026149 through 18771 annotations produced 1 hits



BCL7-like (BCL7-like):

Annotation Number : CG17252
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026149
Gbrowse : chrX:9250678-9252635 (+) // 100.0 //
Probeset : 1628956_at
Accessions : protein= NP_572562;, nucleotide= NM_132334;
FlyMine data for FBgn0026149.
BDGP gene expression has embryonic in situ data for BCL7-like: 15 pix of staining in 11 body parts.
TRiP has 1 RNAi stocks for FBgn0026149 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026149 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain56 ± 14 of 4 0.50Down
Head26 ± 14 of 4 0.20Down
Eye13 ± 04 of 4 0.12Down
Thoracicoabdominal ganglion53 ± 04 of 4 0.50Down
Salivary gland31 ± 24 of 4 0.28Down
Crop37 ± 24 of 4 0.30Down
Midgut40 ± 24 of 4 0.40Down
Tubule11 ± 13 of 4 0.10Down
Hindgut28 ± 34 of 4 0.30Down
Heart11 ± 04 of 4 0.11Down
Fat body65 ± 154 of 4 0.59Down
Ovary385 ± 124 of 4 3.50Up
Testis14 ± 04 of 4 0.10Down
Male accessory glands48 ± 44 of 4 0.40Down
Virgin spermatheca23 ± 14 of 4 0.21Down
Mated spermatheca29 ± 24 of 4 0.26Down
Adult carcass22 ± 14 of 4 0.20Down
Larval CNS505 ± 494 of 4 4.59Up
Larval Salivary gland118 ± 104 of 4 1.07None
Larval midgut76 ± 24 of 4 0.69Down
Larval tubule40 ± 24 of 4 0.40Down
Larval hindgut121 ± 44 of 4 1.10None
Larval fat body62 ± 44 of 4 0.60Down
Larval trachea62 ± 94 of 4 0.57Down
Larval carcass143 ± 144 of 4 1.31None
S2 cells (growing)133 ± 34 of 4 1.21Up
Whole fly110 ± 54 of 4

Looking for FBgn0026149. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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