Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026263 through 18771 annotations produced 1 hits



bip1 (bip1):

Annotation Number : CG7574
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026263
Gbrowse : chr3L:8047429-8051790 (-) // 100.0 //
Probeset : 1639746_at
Accessions : protein= NP_001163375; /// NP_648169;, nucleotide= NM_001169904; /// NM_139912;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0026263.
BioGrid reports that CG7574 interacts with CG7808 .
VDRC has 2 RNAi stocks for FBgn0026263 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain89 14 of 4 0.50Down
Head52 24 of 4 0.30Down
Eye32 24 of 4 0.19Down
Thoracicoabdominal ganglion82 34 of 4 0.50Down
Salivary gland22 70 of 4 0.13Down
Crop35 44 of 4 0.20Down
Midgut29 14 of 4 0.20Down
Tubule94 54 of 4 0.60Down
Hindgut39 14 of 4 0.20Down
Heart33 24 of 4 0.20Down
Fat body67 84 of 4 0.40Down
Ovary450 74 of 4 2.60Up
Testis34 24 of 4 0.20Down
Male accessory glands107 54 of 4 0.60Down
Virgin spermatheca80 54 of 4 0.47Down
Mated spermatheca85 84 of 4 0.51Down
Adult carcass36 44 of 4 0.20Down
Larval CNS315 284 of 4 1.86Up
Larval Salivary gland65 34 of 4 0.38Down
Larval midgut27 51 of 4 0.16Down
Larval tubule93 64 of 4 0.60Down
Larval hindgut65 44 of 4 0.38Down
Larval fat body140 104 of 4 0.80None
Larval trachea117 144 of 4 0.69Down
Larval carcass79 94 of 4 0.47Down
S2 cells (growing)24 34 of 4 0.15Down
Whole fly169 64 of 4

Looking for FBgn0026263. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime