FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0026314 through 18771 annotations produced 1 hits

UDP-glycosyltransferase (Ugt35b):

Annotation Number : CG6649
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026314
Gbrowse : chr3R:6994218-6995955 (-) // 100.0 //
Probeset : 1626970_at
Accessions : protein= NP_524313;, nucleotide= NM_079589;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0026314.
BDGP gene expression has embryonic in situ data for Ugt35b: 4 pix of staining in 1 body parts.
Homophila reports that CG6649 is a close match (5e-56) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 2 RNAi stocks for FBgn0026314 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1117 ± 65	4 of 4	6.80	Up
Head	895 ± 92	4 of 4	5.50	Up
Eye	293 ± 75	4 of 4	1.79	None
Thoracicoabdominal ganglion	1542 ± 67	4 of 4	9.40	Up
Salivary gland	42 ± 9	4 of 4	0.26	Down
Crop	6 ± 1	1 of 4	0.00	Down
Midgut	4 ± 2	0 of 4	0.00	Down
Tubule	3420 ± 249	4 of 4	20.90	Up
Hindgut	19 ± 1	4 of 4	0.10	Down
Heart	19 ± 7	4 of 4	0.12	Down
Fat body	37 ± 12	4 of 4	0.23	Down
Ovary	3 ± 0	1 of 4	0.00	Down
Testis	10 ± 1	4 of 4	0.10	Down
Male accessory glands	3320 ± 256	4 of 4	20.30	Up
Virgin spermatheca	119 ± 8	4 of 4	0.73	Down
Mated spermatheca	70 ± 11	4 of 4	0.43	Down
Adult carcass	102 ± 8	4 of 4	0.60	Down
Larval CNS	11 ± 5	4 of 4	0.07	Down
Larval Salivary gland	9 ± 0	1 of 4	0.06	Down
Larval midgut	2 ± 0	0 of 4	0.02	Down
Larval tubule	98 ± 28	4 of 4	0.60	None
Larval hindgut	6 ± 1	3 of 4	0.04	Down
Larval fat body	4 ± 1	0 of 4	0.00	Down
Larval trachea	6 ± 3	1 of 4	0.04	Down
Larval carcass	1 ± 0	0 of 4	0.01	Down
S2 cells (growing)	4 ± 0	0 of 4	0.03	Down
Whole fly	163 ± 11	4 of 4

Looking for FBgn0026314. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720