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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026324 through 18771 annotations produced 1 hits



TBP-associated factor 16kD (Taf10b):

Annotation Number : CG3069
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026324
Gbrowse : chr2L:2767280-2768166 (-) // 100.0 //
Probeset : 1630803_at
Accessions : protein= NP_477418;, nucleotide= NM_058070;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred
Interpro : 0003702 // RNA polymerase II transcription factor activity // inferred from direct assay /// 0003702 // RNA polymerase I
FlyMine data for FBgn0026324.
BioGrid reports that CG3069 interacts with CG5838 CG6506 CG7128 CG8357 CG9099 .
VDRC has 2 RNAi stocks for FBgn0026324 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain244 ± 64 of 4 2.20Up
Head137 ± 134 of 4 1.20None
Eye213 ± 54 of 4 1.93Up
Thoracicoabdominal ganglion210 ± 74 of 4 1.90Up
Salivary gland131 ± 134 of 4 1.19None
Crop76 ± 64 of 4 0.70Down
Midgut70 ± 34 of 4 0.60Down
Tubule89 ± 34 of 4 0.80Down
Hindgut105 ± 44 of 4 1.00None
Heart154 ± 64 of 4 1.40Up
Fat body99 ± 114 of 4 0.90None
Ovary138 ± 24 of 4 1.20Up
Testis153 ± 44 of 4 1.40Up
Male accessory glands160 ± 94 of 4 1.50Up
Virgin spermatheca60 ± 24 of 4 0.55Down
Mated spermatheca71 ± 44 of 4 0.65Down
Adult carcass84 ± 64 of 4 0.80None
Larval CNS283 ± 134 of 4 2.56Up
Larval Salivary gland215 ± 94 of 4 1.95Up
Larval midgut50 ± 14 of 4 0.46Down
Larval tubule97 ± 64 of 4 0.90None
Larval hindgut93 ± 44 of 4 0.84None
Larval fat body98 ± 54 of 4 0.90None
Larval trachea160 ± 24 of 4 1.45Up
Larval carcass104 ± 34 of 4 0.94None
S2 cells (growing)125 ± 54 of 4 1.14None
Whole fly110 ± 84 of 4

Looking for FBgn0026324. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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