FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0026361 through 18771 annotations produced 1 hits

septin (Sep-05):

Annotation Number : CG2916
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026361
Gbrowse : chr2R:3847628-3849427 (-) // 100.0 //
Probeset : 1624997_s_at
Accessions : protein= NP_651961; /// NP_724632;, nucleotide= NM_143704; /// NM_165578;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay /// 0005940 // septin ring // inferred from sequ
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable aut
FlyMine data for FBgn0026361.
BDGP gene expression has embryonic in situ data for Sep-05: 28 pix of staining in 23 body parts.
Homophila reports that CG2916 is a close match (5e-60) to human gene MSF;MSF1;NAPB;SEPT9 (NP_006631), a gene associated with Amyotrophy, hereditary neuralgic, 162100 (3);Leukemia, acute myeloid, therapy-related (1);Ovarian carcinoma (1).
TRiP has 1 RNAi stocks for FBgn0026361 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026361 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 0	4 of 4	0.20	Down
Head	5 ± 1	1 of 4	0.10	Down
Eye	6 ± 1	2 of 4	0.13	Down
Thoracicoabdominal ganglion	20 ± 2	4 of 4	0.40	Down
Salivary gland	15 ± 5	0 of 4	0.30	Down
Crop	6 ± 2	1 of 4	0.10	Down
Midgut	14 ± 1	4 of 4	0.30	Down
Tubule	9 ± 1	2 of 4	0.20	Down
Hindgut	8 ± 1	4 of 4	0.20	Down
Heart	6 ± 1	2 of 4	0.13	Down
Fat body	11 ± 4	3 of 4	0.22	Down
Ovary	102 ± 1	4 of 4	2.00	Up
Testis	18 ± 1	4 of 4	0.40	Down
Male accessory glands	14 ± 2	3 of 4	0.30	Down
Virgin spermatheca	13 ± 1	4 of 4	0.26	Down
Mated spermatheca	9 ± 1	3 of 4	0.19	Down
Adult carcass	11 ± 2	1 of 4	0.20	Down
Larval CNS	84 ± 4	4 of 4	1.63	Up
Larval Salivary gland	6 ± 1	2 of 4	0.13	Down
Larval midgut	13 ± 2	4 of 4	0.27	Down
Larval tubule	9 ± 0	2 of 4	0.20	Down
Larval hindgut	10 ± 1	4 of 4	0.20	Down
Larval fat body	17 ± 3	3 of 4	0.30	Down
Larval trachea	30 ± 4	4 of 4	0.59	Down
Larval carcass	34 ± 9	4 of 4	0.66	None
S2 cells (growing)	91 ± 1	4 of 4	1.75	Up
Whole fly	52 ± 2	4 of 4

Looking for FBgn0026361. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720