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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026384 through 18771 annotations produced 1 hits



Olfactory receptor 59D.1 (Or59a):

Annotation Number : CG9820
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026384
Gbrowse : chr2R:19327390-19328588 (-) // 100.0 //
Probeset : 1640623_at
Accessions : protein= NP_523821;, nucleotide= NM_079097;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0026384.
VDRC has 3 RNAi stocks for FBgn0026384 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 10 of 4 1.20None
Head2 10 of 4 0.80None
Eye5 11 of 4 2.06None
Thoracicoabdominal ganglion6 11 of 4 2.50None
Salivary gland18 20 of 4 7.53Up
Crop4 11 of 4 1.70None
Midgut4 20 of 4 1.80None
Tubule4 00 of 4 1.70Up
Hindgut3 10 of 4 1.40None
Heart2 00 of 4 0.98None
Fat body6 40 of 4 2.57None
Ovary4 11 of 4 2.00None
Testis6 02 of 4 2.80Up
Male accessory glands27 14 of 411.00Up
Virgin spermatheca1 00 of 4 0.51None
Mated spermatheca6 10 of 4 2.53Up
Adult carcass3 10 of 4 1.50None
Larval CNS4 13 of 4 1.95None
Larval Salivary gland8 12 of 4 3.58Up
Larval midgut6 10 of 4 2.71Up
Larval tubule6 10 of 4 2.60Up
Larval hindgut5 00 of 4 2.21Up
Larval fat body5 30 of 4 2.40None
Larval trachea4 21 of 4 1.84None
Larval carcass7 13 of 4 3.09Up
S2 cells (growing)4 02 of 4 1.81None
Whole fly2 00 of 4

Looking for FBgn0026384. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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