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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026390 through 18771 annotations produced 1 hits



Olfactory receptor 33B.3 (Or33c):

Annotation Number : CG5006
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026390
Gbrowse : chr2L:11937968-11939202 (+) // 100.0 //
Probeset : 1624082_at
Accessions : protein= NP_523555;, nucleotide= NM_078831;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0026390.
VDRC has 2 RNAi stocks for FBgn0026390 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 1.30None
Head6 ± 10 of 4 2.20None
Eye3 ± 10 of 4 1.11None
Thoracicoabdominal ganglion1 ± 00 of 4 0.40None
Salivary gland6 ± 20 of 4 2.18None
Crop7 ± 20 of 4 2.30None
Midgut4 ± 00 of 4 1.40None
Tubule4 ± 00 of 4 1.30None
Hindgut5 ± 11 of 4 1.60None
Heart1 ± 00 of 4 0.44None
Fat body1 ± 00 of 4 0.54None
Ovary2 ± 00 of 4 0.80None
Testis5 ± 11 of 4 1.60None
Male accessory glands7 ± 10 of 4 2.60None
Virgin spermatheca3 ± 10 of 4 1.01None
Mated spermatheca6 ± 00 of 4 1.98None
Adult carcass7 ± 10 of 4 2.30None
Larval CNS0 ± 00 of 4 0.27None
Larval Salivary gland3 ± 10 of 4 1.03None
Larval midgut8 ± 20 of 4 2.68None
Larval tubule5 ± 00 of 4 1.70None
Larval hindgut2 ± 10 of 4 0.91None
Larval fat body6 ± 10 of 4 2.00None
Larval trachea1 ± 10 of 4 0.35None
Larval carcass2 ± 10 of 4 0.87None
S2 cells (growing)2 ± 00 of 4 0.96None
Whole fly3 ± 10 of 4

Looking for FBgn0026390. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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