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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026394 through 18771 annotations produced 1 hits



Olfactory receptor 24D.1 (Or24a):

Annotation Number : CG11767
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026394
Gbrowse : chr2L:4164688-4166101 (-) // 100.0 //
Probeset : 1631063_at
Accessions : protein= NP_523470;, nucleotide= NM_078746;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0026394.
VDRC has 2 RNAi stocks for FBgn0026394 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 2.80None
Head1 ± 00 of 4 2.90None
Eye0 ± 00 of 4 1.53None
Thoracicoabdominal ganglion1 ± 00 of 4 4.20None
Salivary gland3 ± 10 of 4 8.59None
Crop0 ± 00 of 4 2.10None
Midgut0 ± 00 of 4 1.40None
Tubule1 ± 00 of 4 3.80Up
Hindgut0 ± 00 of 4 1.60None
Heart0 ± 00 of 4 1.12None
Fat body1 ± 00 of 4 3.41None
Ovary0 ± 00 of 4 2.00None
Testis1 ± 00 of 4 4.40None
Male accessory glands1 ± 00 of 4 2.20None
Virgin spermatheca1 ± 00 of 4 3.12None
Mated spermatheca1 ± 00 of 4 2.59None
Adult carcass2 ± 10 of 4 5.90None
Larval CNS1 ± 00 of 4 2.41None
Larval Salivary gland2 ± 10 of 4 5.71None
Larval midgut0 ± 00 of 4 1.29None
Larval tubule0 ± 00 of 4 1.00None
Larval hindgut0 ± 00 of 4 0.94None
Larval fat body3 ± 10 of 4 8.20None
Larval trachea1 ± 10 of 4 3.24None
Larval carcass0 ± 00 of 4 0.88None
S2 cells (growing)0 ± 00 of 4 1.06None
Whole fly0 ± 00 of 4

Looking for FBgn0026394. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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