FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0026395 through 18771 annotations produced 2 hits

Olfactory receptor 23A.1 /// Proteasome beta4R2 subunit (Or23a /// Prosbeta4R2):

Annotation Number : CG17302
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031443
Gbrowse : chr2L:2655393-2660830 (+) // 100.0 //
Probeset : 1638878_at
Accessions : protein= NP_722823;, nucleotide= NM_164491;
Pathway : 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic
Interpro : 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase act
FlyMine data for FBgn0031443.
BDGP gene expression has embryonic in situ data for CG17302: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0031443 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.40	None
Head	3 ± 1	0 of 4	0.70	None
Eye	4 ± 1	0 of 4	0.92	None
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.80	None
Salivary gland	4 ± 1	0 of 4	1.01	None
Crop	2 ± 1	0 of 4	0.50	None
Midgut	2 ± 0	0 of 4	0.50	Down
Tubule	3 ± 0	0 of 4	0.80	Down
Hindgut	3 ± 1	0 of 4	0.70	None
Heart	3 ± 1	0 of 4	0.82	None
Fat body	5 ± 3	1 of 4	1.16	None
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	17 ± 2	4 of 4	3.60	Up
Male accessory glands	8 ± 2	0 of 4	1.70	None
Virgin spermatheca	1 ± 0	0 of 4	0.36	Down
Mated spermatheca	2 ± 1	0 of 4	0.56	None
Adult carcass	7 ± 3	2 of 4	1.50	None
Larval CNS	3 ± 1	0 of 4	0.71	None
Larval Salivary gland	4 ± 2	0 of 4	0.96	None
Larval midgut	3 ± 1	0 of 4	0.63	None
Larval tubule	3 ± 0	0 of 4	0.60	None
Larval hindgut	3 ± 1	0 of 4	0.72	None
Larval fat body	8 ± 1	0 of 4	1.80	None
Larval trachea	2 ± 2	0 of 4	0.59	None
Larval carcass	3 ± 1	0 of 4	0.64	None
S2 cells (growing)	1 ± 0	0 of 4	0.32	Down
Whole fly	4 ± 0	2 of 4

Olfactory receptor 23A.1 (Or23a):

Annotation Number : CG9880
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026395
Gbrowse : chr2L:2654124-2655461 (+) // 100.0 //
Probeset : 1638928_at
Accessions : protein= NP_523458;, nucleotide= NM_078734;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0026395.
TRiP has 1 RNAi stocks for FBgn0026395 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026395 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	1 of 4	0.60	None
Head	8 ± 0	4 of 4	1.20	None
Eye	4 ± 1	1 of 4	0.71	None
Thoracicoabdominal ganglion	6 ± 0	1 of 4	1.00	None
Salivary gland	11 ± 3	2 of 4	1.78	None
Crop	8 ± 1	2 of 4	1.30	None
Midgut	10 ± 1	4 of 4	1.60	Up
Tubule	5 ± 0	0 of 4	0.90	None
Hindgut	6 ± 0	0 of 4	1.00	None
Heart	3 ± 0	0 of 4	0.59	None
Fat body	5 ± 1	2 of 4	0.83	None
Ovary	3 ± 0	1 of 4	0.60	None
Testis	19 ± 1	4 of 4	3.10	Up
Male accessory glands	5 ± 2	0 of 4	0.80	None
Virgin spermatheca	5 ± 1	2 of 4	0.76	None
Mated spermatheca	6 ± 0	3 of 4	1.00	None
Adult carcass	9 ± 1	1 of 4	1.40	None
Larval CNS	3 ± 0	2 of 4	0.58	None
Larval Salivary gland	7 ± 1	2 of 4	1.15	None
Larval midgut	10 ± 1	3 of 4	1.56	None
Larval tubule	5 ± 1	0 of 4	0.80	None
Larval hindgut	5 ± 1	2 of 4	0.86	None
Larval fat body	14 ± 2	3 of 4	2.20	Up
Larval trachea	3 ± 2	2 of 4	0.52	None
Larval carcass	4 ± 0	2 of 4	0.64	None
S2 cells (growing)	4 ± 0	2 of 4	0.63	None
Whole fly	6 ± 1	2 of 4

Looking for FBgn0026395. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720