Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026409 through 18771 annotations produced 1 hits



Mitochondrial phophate carrier protein (Mpcp):

Annotation Number : CG4994
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026409
Gbrowse : chr3L:14530717-14533546 (+) // 100.0 //
Probeset : 1637525_s_at
Accessions : protein= NP_524069; /// NP_729978;, nucleotide= NM_079345; /// NM_168588;
Pathway : 0005739 // mitochondrion // non-traceable author statement /// 0005740 // mitochondrial envelope // inferred from sequen
Interpro : 0005488 // binding // inferred from electronic annotation /// 0015114 // phosphate transmembrane transporter activity //
FlyMine data for FBgn0026409.
BDGP gene expression has embryonic in situ data for Mpcp: 10 pix of staining in 13 body parts.
Homophila reports that CG4994 is a close match (2e-15) to human gene DNC;MCPHA;MUP1;SLC25A19 (NP_068380), a gene associated with Microcephaly, Amish type, 607196 (3).
BioGrid reports that CG4994 interacts with CG7056 CG7113 CG7610 CG8316 .
VDRC has 2 RNAi stocks for FBgn0026409 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2873 674 of 4 1.20Up
Head3528 564 of 4 1.50Up
Eye5661 434 of 4 2.40Up
Thoracicoabdominal ganglion4006 1634 of 4 1.70Up
Salivary gland9268 2494 of 4 3.93Up
Crop3433 1764 of 4 1.50Up
Midgut3551 1304 of 4 1.50Up
Tubule6342 1464 of 4 2.70Up
Hindgut4230 1134 of 4 1.80Up
Heart4268 2734 of 4 1.81Up
Fat body4701 3914 of 4 2.00Up
Ovary1889 214 of 4 0.80Down
Testis911 224 of 4 0.40Down
Male accessory glands3917 704 of 4 1.70Up
Virgin spermatheca5013 634 of 4 2.13Up
Mated spermatheca4727 994 of 4 2.01Up
Adult carcass3672 814 of 4 1.60Up
Larval CNS1919 764 of 4 0.81Down
Larval Salivary gland3216 2324 of 4 1.37Up
Larval midgut4633 814 of 4 1.97Up
Larval tubule3326 1954 of 4 1.40Up
Larval hindgut4328 464 of 4 1.84Up
Larval fat body1860 1784 of 4 0.80None
Larval trachea2557 1314 of 4 1.09None
Larval carcass2628 1674 of 4 1.12None
S2 cells (growing)2735 274 of 4 1.16Up
Whole fly2356 614 of 4

Looking for FBgn0026409. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime