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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026479 through 18771 annotations produced 1 hits



noodle (Drp1):

Annotation Number : CG3210
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026479
Gbrowse : chr2L:2581436-2585448 (-) // 100.0 //
Probeset : 1641560_at
Accessions : protein= NP_608694;, nucleotide= NM_134850;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay /// 0005875 // microtubule associated complex //
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from ele
FlyMine data for FBgn0026479.
Homophila reports that CG3210 is a close match (1e-20) to human gene NPG;NTG;OPA1 (NP_570850), a gene associated with Optic atrophy 1, 165500 (3);Optic atrophy and deafness, 125250 (3);{Glaucoma, normal tension, susceptibility to}, 606657 (3).
BioGrid reports that CG3210 interacts with CG5327 CG5359 CG5383 CG6920 CG7352 CG7856 .
TRiP has 1 RNAi stocks for FBgn0026479 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026479 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain467 74 of 4 1.30Up
Head278 74 of 4 0.80Down
Eye252 74 of 4 0.70Down
Thoracicoabdominal ganglion554 254 of 4 1.50Up
Salivary gland271 244 of 4 0.76Down
Crop430 84 of 4 1.20Up
Midgut445 64 of 4 1.20Up
Tubule385 154 of 4 1.10None
Hindgut347 64 of 4 1.00None
Heart373 104 of 4 1.04None
Fat body358 344 of 4 1.00None
Ovary465 64 of 4 1.30Up
Testis654 84 of 4 1.80Up
Male accessory glands470 54 of 4 1.30Up
Virgin spermatheca186 44 of 4 0.52Down
Mated spermatheca172 124 of 4 0.48Down
Adult carcass293 54 of 4 0.80Down
Larval CNS509 184 of 4 1.42Up
Larval Salivary gland627 274 of 4 1.75Up
Larval midgut465 234 of 4 1.29Up
Larval tubule549 174 of 4 1.50Up
Larval hindgut414 204 of 4 1.16None
Larval fat body244 304 of 4 0.70Down
Larval trachea312 54 of 4 0.87Down
Larval carcass448 104 of 4 1.25Up
S2 cells (growing)353 54 of 4 0.98None
Whole fly359 94 of 4

Looking for FBgn0026479. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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