FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0026573 through 18771 annotations produced 3 hits

(CG8290):

Annotation Number : CG8290
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026573
Gbrowse : chr2R:7858178-7865236 (+) // 100.0 //
Probeset : 1636126_at
Accessions : protein= NP_610716; /// NP_725094;, nucleotide= NM_136872; /// NM_165856;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation /// 0016251 // general RNA polymerase II transcriptio
FlyMine data for FBgn0026573.
BDGP gene expression has embryonic in situ data for BEST:LD29214: 17 pix of staining in 8 body parts.
Homophila reports that CG8290 is a close match (8e-13) to human gene ATRX;MRXHF1;SFM1;SHS;XH2;XNP (NP_612114), a gene associated with Alpha-thalassemia myelodysplasia syndrome, somatic, 300448 (3);Alpha-thalassemia/mental retardation syndrome, 301040 (3);Mental retardation-hypotonic facies syndrome, X-linked, 309580 (3).
TRiP has 1 RNAi stocks for FBgn0026573 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026573 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	73 ± 6	4 of 4	1.60	Up
Head	24 ± 2	4 of 4	0.50	Down
Eye	15 ± 1	4 of 4	0.33	Down
Thoracicoabdominal ganglion	46 ± 3	4 of 4	1.00	None
Salivary gland	26 ± 5	2 of 4	0.57	Down
Crop	30 ± 3	4 of 4	0.70	Down
Midgut	23 ± 4	4 of 4	0.50	Down
Tubule	17 ± 0	3 of 4	0.40	Down
Hindgut	20 ± 2	4 of 4	0.40	Down
Heart	10 ± 1	4 of 4	0.23	Down
Fat body	38 ± 8	4 of 4	0.83	None
Ovary	178 ± 3	4 of 4	3.90	Up
Testis	32 ± 4	4 of 4	0.70	None
Male accessory glands	35 ± 1	4 of 4	0.80	Down
Virgin spermatheca	51 ± 7	4 of 4	1.12	None
Mated spermatheca	43 ± 4	4 of 4	0.94	None
Adult carcass	27 ± 4	3 of 4	0.60	Down
Larval CNS	148 ± 42	4 of 4	3.23	Up
Larval Salivary gland	39 ± 3	4 of 4	0.87	None
Larval midgut	25 ± 3	4 of 4	0.55	Down
Larval tubule	31 ± 2	4 of 4	0.70	Down
Larval hindgut	28 ± 3	4 of 4	0.61	Down
Larval fat body	49 ± 4	4 of 4	1.10	None
Larval trachea	21 ± 2	4 of 4	0.46	Down
Larval carcass	31 ± 4	4 of 4	0.68	Down
S2 cells (growing)	60 ± 5	4 of 4	1.31	None
Whole fly	46 ± 2	4 of 4

(CG8290):

Annotation Number : CG8290
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026573
Gbrowse : chr2R:7858178-7862774 (+) // 100.0 //
Probeset : 1625813_at
Accessions : protein= NP_610716; /// NP_725094;, nucleotide= NM_136872; /// NM_165856;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation /// 0016251 // general RNA polymerase II transcriptio
FlyMine data for FBgn0026573.
BDGP gene expression has embryonic in situ data for BEST:LD29214: 17 pix of staining in 8 body parts.
Homophila reports that CG8290 is a close match (8e-13) to human gene ATRX;MRXHF1;SFM1;SHS;XH2;XNP (NP_612114), a gene associated with Alpha-thalassemia myelodysplasia syndrome, somatic, 300448 (3);Alpha-thalassemia/mental retardation syndrome, 301040 (3);Mental retardation-hypotonic facies syndrome, X-linked, 309580 (3).
TRiP has 1 RNAi stocks for FBgn0026573 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026573 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	48 ± 2	4 of 4	2.00	Up
Head	18 ± 1	4 of 4	0.80	Down
Eye	18 ± 2	4 of 4	0.75	None
Thoracicoabdominal ganglion	49 ± 2	4 of 4	2.00	Up
Salivary gland	31 ± 4	3 of 4	1.31	None
Crop	19 ± 1	4 of 4	0.80	Down
Midgut	23 ± 2	4 of 4	1.00	None
Tubule	21 ± 1	4 of 4	0.90	Down
Hindgut	15 ± 1	4 of 4	0.70	Down
Heart	11 ± 1	4 of 4	0.46	Down
Fat body	15 ± 1	0 of 4	0.62	Down
Ovary	70 ± 3	4 of 4	2.90	Up
Testis	12 ± 0	4 of 4	0.50	Down
Male accessory glands	11 ± 1	3 of 4	0.50	Down
Virgin spermatheca	21 ± 0	1 of 4	0.86	Down
Mated spermatheca	22 ± 0	4 of 4	0.91	None
Adult carcass	14 ± 3	2 of 4	0.60	None
Larval CNS	121 ± 2	4 of 4	5.00	Up
Larval Salivary gland	17 ± 1	4 of 4	0.70	Down
Larval midgut	17 ± 1	4 of 4	0.73	Down
Larval tubule	19 ± 1	4 of 4	0.80	Down
Larval hindgut	13 ± 1	4 of 4	0.56	Down
Larval fat body	19 ± 1	4 of 4	0.80	Down
Larval trachea	37 ± 2	4 of 4	1.55	Up
Larval carcass	26 ± 0	4 of 4	1.10	None
S2 cells (growing)	43 ± 1	4 of 4	1.81	Up
Whole fly	24 ± 0	4 of 4

(CG8290):

Annotation Number : CG8290
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026573
Gbrowse : chr2R:7858192-7859471 (+) // 100.0 //
Probeset : 1633662_a_at
Accessions : protein= NP_610716; /// NP_725094;, nucleotide= NM_136872; /// NM_165856;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation /// 0016251 // general RNA polymerase II transcriptio
FlyMine data for FBgn0026573.
BDGP gene expression has embryonic in situ data for BEST:LD29214: 17 pix of staining in 8 body parts.
Homophila reports that CG8290 is a close match (8e-13) to human gene ATRX;MRXHF1;SFM1;SHS;XH2;XNP (NP_612114), a gene associated with Alpha-thalassemia myelodysplasia syndrome, somatic, 300448 (3);Alpha-thalassemia/mental retardation syndrome, 301040 (3);Mental retardation-hypotonic facies syndrome, X-linked, 309580 (3).
TRiP has 1 RNAi stocks for FBgn0026573 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026573 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 0	0 of 4	0.70	None
Head	1 ± 0	0 of 4	0.10	None
Eye	2 ± 0	0 of 4	0.25	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.30	None
Salivary gland	6 ± 3	0 of 4	0.60	None
Crop	2 ± 1	0 of 4	0.20	None
Midgut	5 ± 1	0 of 4	0.50	None
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	3 ± 1	0 of 4	0.30	None
Heart	2 ± 1	0 of 4	0.27	None
Fat body	4 ± 0	0 of 4	0.41	None
Ovary	16 ± 1	4 of 4	1.60	None
Testis	7 ± 1	1 of 4	0.70	None
Male accessory glands	3 ± 1	0 of 4	0.30	None
Virgin spermatheca	1 ± 0	0 of 4	0.11	None
Mated spermatheca	1 ± 0	0 of 4	0.10	None
Adult carcass	2 ± 0	0 of 4	0.30	None
Larval CNS	3 ± 0	0 of 4	0.38	None
Larval Salivary gland	2 ± 0	0 of 4	0.19	None
Larval midgut	1 ± 0	0 of 4	0.14	None
Larval tubule	1 ± 0	0 of 4	0.20	None
Larval hindgut	1 ± 0	0 of 4	0.13	None
Larval fat body	5 ± 0	0 of 4	0.50	None
Larval trachea	3 ± 3	0 of 4	0.32	None
Larval carcass	2 ± 0	0 of 4	0.26	None
S2 cells (growing)	20 ± 1	4 of 4	2.02	Up
Whole fly	10 ± 3	1 of 4

Looking for FBgn0026573. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720