FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0026575 through 18771 annotations produced 1 hits

hangover (hang):

Annotation Number : CG32575
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026575
Gbrowse : chrX:16316876-16331511 (+) // 99.71 //
Probeset : 1631271_a_at
Accessions : protein= NP_001138204; /// NP_727979; /// NP_727980;, nucleotide= NM_001144732; /// NM_167520; /// NM_167521;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
Interpro : 0003676 // nucleic acid binding // inferred from sequence or structural similarity /// 0003676 // nucleic acid binding /
FlyMine data for FBgn0026575.
BDGP gene expression has embryonic in situ data for BcDNA:LD22118: 19 pix of staining in 14 body parts.
BioGrid reports that CG32575 interacts with CG9099 .
TRiP has 2 RNAi stocks for FBgn0026575 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026575 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	455 ± 5	4 of 4	2.30	Up
Head	144 ± 5	4 of 4	0.70	None
Eye	185 ± 12	4 of 4	0.96	None
Thoracicoabdominal ganglion	374 ± 9	4 of 4	1.90	Up
Salivary gland	152 ± 9	4 of 4	0.79	None
Crop	134 ± 7	4 of 4	0.70	Down
Midgut	82 ± 4	4 of 4	0.40	Down
Tubule	92 ± 3	4 of 4	0.50	Down
Hindgut	111 ± 3	4 of 4	0.60	Down
Heart	166 ± 11	4 of 4	0.86	None
Fat body	144 ± 19	4 of 4	0.74	None
Ovary	629 ± 27	4 of 4	3.20	Up
Testis	27 ± 2	4 of 4	0.10	Down
Male accessory glands	133 ± 5	4 of 4	0.70	Down
Virgin spermatheca	87 ± 1	4 of 4	0.45	Down
Mated spermatheca	88 ± 7	4 of 4	0.45	Down
Adult carcass	105 ± 17	4 of 4	0.50	Down
Larval CNS	846 ± 39	4 of 4	4.36	Up
Larval Salivary gland	175 ± 10	4 of 4	0.91	None
Larval midgut	123 ± 8	4 of 4	0.64	Down
Larval tubule	144 ± 4	4 of 4	0.70	None
Larval hindgut	174 ± 7	4 of 4	0.90	None
Larval fat body	130 ± 5	4 of 4	0.70	Down
Larval trachea	476 ± 17	4 of 4	2.46	Up
Larval carcass	196 ± 17	4 of 4	1.01	None
S2 cells (growing)	272 ± 3	4 of 4	1.40	Up
Whole fly	194 ± 17	4 of 4

Looking for FBgn0026575. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720