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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026576 through 18771 annotations produced 1 hits



Phosphatidylserine decarboxylase (CG5991):

Annotation Number : CG5991
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026576
Gbrowse : chr3R:19876510-19879314 (+) // 100.0 //
Probeset : 1629153_s_at
Accessions : protein= NP_651208; /// NP_732948; /// NP_732949;, nucleotide= NM_142951; /// NM_170120; /// NM_170121;
Interpro : 0004609 // phosphatidylserine decarboxylase activity // inferred from sequence or structural similarity /// 0004609 // p
FlyMine data for FBgn0026576.
BioGrid reports that CG5991 interacts with CG8239 .
VDRC has 2 RNAi stocks for FBgn0026576 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain178 ± 44 of 4 0.50Down
Head1006 ± 494 of 4 2.90Up
Eye406 ± 454 of 4 1.18None
Thoracicoabdominal ganglion183 ± 84 of 4 0.50Down
Salivary gland236 ± 74 of 4 0.68Down
Crop320 ± 54 of 4 0.90None
Midgut75 ± 44 of 4 0.20Down
Tubule298 ± 214 of 4 0.90Down
Hindgut165 ± 54 of 4 0.50Down
Heart878 ± 724 of 4 2.54Up
Fat body1812 ± 704 of 4 5.24Up
Ovary425 ± 74 of 4 1.20None
Testis125 ± 14 of 4 0.40Down
Male accessory glands131 ± 54 of 4 0.40Down
Virgin spermatheca1122 ± 784 of 4 3.24Up
Mated spermatheca1669 ± 1594 of 4 4.82Up
Adult carcass890 ± 504 of 4 2.60Up
Larval CNS293 ± 204 of 4 0.85None
Larval Salivary gland144 ± 94 of 4 0.42Down
Larval midgut77 ± 44 of 4 0.22Down
Larval tubule171 ± 54 of 4 0.50Down
Larval hindgut194 ± 164 of 4 0.56Down
Larval fat body455 ± 504 of 4 1.30None
Larval trachea61 ± 64 of 4 0.18Down
Larval carcass78 ± 64 of 4 0.23Down
S2 cells (growing)270 ± 44 of 4 0.78None
Whole fly345 ± 264 of 4

Looking for FBgn0026576. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime