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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026619 through 18771 annotations produced 1 hits



tafazzins (Taz):

Annotation Number : CG8766
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026619
Gbrowse : chr2R:8640529-8643915 (-) // 100.0 //
Probeset : 1626481_a_at
Accessions : protein= NP_477432; /// NP_725226; /// NP_725227;, nucleotide= NM_058084; /// NM_165947; /// NM_165948;
Pathway : 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation //
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008415 // acyltransferase activity // inferred fro
FlyMine data for FBgn0026619.
BDGP gene expression has embryonic in situ data for tafazzin: 11 pix of staining in 8 body parts.
Homophila reports that CG8766 is a close match (3e-51) to human gene BTHS;CMD3A;EFE2;LVNCX;TAZ (NP_851829), a gene associated with Barth syndrome, 302060 (3);Cardiomyopathy, dilated, 3A, 300069 (3);Endocardial fibroelastosis-2 (2);Noncompaction of left ventricular myocardium, isolated, 300183 (3).
TRiP has 2 RNAi stocks for FBgn0026619 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026619 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain429 84 of 4 2.40Up
Head200 104 of 4 1.10None
Eye267 114 of 4 1.52Up
Thoracicoabdominal ganglion443 114 of 4 2.50Up
Salivary gland82 44 of 4 0.47Down
Crop86 24 of 4 0.50Down
Midgut304 94 of 4 1.70Up
Tubule527 544 of 4 3.00Up
Hindgut146 84 of 4 0.80None
Heart150 94 of 4 0.86None
Fat body182 234 of 4 1.04None
Ovary216 64 of 4 1.20Up
Testis440 174 of 4 2.50Up
Male accessory glands69 54 of 4 0.40Down
Virgin spermatheca154 134 of 4 0.88None
Mated spermatheca141 94 of 4 0.81Down
Adult carcass157 34 of 4 0.90None
Larval CNS112 64 of 4 0.64Down
Larval Salivary gland55 54 of 4 0.32Down
Larval midgut320 244 of 4 1.83Up
Larval tubule209 154 of 4 1.20None
Larval hindgut95 54 of 4 0.55Down
Larval fat body64 333 of 4 0.40Down
Larval trachea66 64 of 4 0.38Down
Larval carcass58 44 of 4 0.33Down
S2 cells (growing)110 44 of 4 0.63Down
Whole fly175 94 of 4

Looking for FBgn0026619. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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