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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026666 through 18771 annotations produced 1 hits



lethal (1) G0136 (l(1)G0136):

Annotation Number : CG8198
Flybase ID : FBgn0026666
Gbrowse : chrX:15628312-15629814 (+) // 100.0 //
Probeset : 1640339_at
Accessions : protein= NP_573062;, nucleotide= NM_132834;
Interpro : 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferre
FlyMine data for FBgn0026666.
BioGrid reports that CG8198 interacts with CG8907 .
VDRC has 1 RNAi stocks for FBgn0026666 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain889 164 of 4 2.80Up
Head403 84 of 4 1.30Up
Eye339 104 of 4 1.07None
Thoracicoabdominal ganglion1144 304 of 4 3.60Up
Salivary gland216 94 of 4 0.68Down
Crop150 94 of 4 0.50Down
Midgut136 34 of 4 0.40Down
Tubule362 114 of 4 1.10Up
Hindgut226 74 of 4 0.70Down
Heart290 84 of 4 0.92None
Fat body207 184 of 4 0.65Down
Ovary191 54 of 4 0.60Down
Testis441 124 of 4 1.40Up
Male accessory glands161 104 of 4 0.50Down
Virgin spermatheca199 84 of 4 0.63Down
Mated spermatheca204 214 of 4 0.64Down
Adult carcass782 214 of 4 2.50Up
Larval CNS165 114 of 4 0.52Down
Larval Salivary gland199 114 of 4 0.63Down
Larval midgut90 44 of 4 0.29Down
Larval tubule179 54 of 4 0.60Down
Larval hindgut176 114 of 4 0.56Down
Larval fat body174 124 of 4 0.50Down
Larval trachea134 134 of 4 0.42Down
Larval carcass194 154 of 4 0.61Down
S2 cells (growing)264 54 of 4 0.83None
Whole fly317 254 of 4

Looking for FBgn0026666. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime