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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026737 through 18771 annotations produced 1 hits



Anon-becker2 (CG6171):

Annotation Number : CG6171
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026737
Gbrowse : chr3R:11188689-11189653 (-) // 100.0 //
Probeset : 1637282_at
Accessions : protein= NP_001097801; /// NP_650455;, nucleotide= NM_001104331; /// NM_142198;
Interpro : 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0003906 // DNA-(apurinic
FlyMine data for FBgn0026737.
VDRC has 4 RNAi stocks for FBgn0026737 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain165 34 of 4 1.30Up
Head86 14 of 4 0.70Down
Eye108 34 of 4 0.82Down
Thoracicoabdominal ganglion188 44 of 4 1.40Up
Salivary gland62 34 of 4 0.47Down
Crop74 24 of 4 0.60Down
Midgut76 44 of 4 0.60Down
Tubule45 44 of 4 0.30Down
Hindgut71 24 of 4 0.50Down
Heart58 34 of 4 0.44Down
Fat body39 24 of 4 0.30Down
Ovary279 44 of 4 2.10Up
Testis121 54 of 4 0.90None
Male accessory glands48 54 of 4 0.40Down
Virgin spermatheca29 14 of 4 0.23Down
Mated spermatheca29 24 of 4 0.22Down
Adult carcass50 24 of 4 0.40Down
Larval CNS136 34 of 4 1.04None
Larval Salivary gland72 24 of 4 0.55Down
Larval midgut31 14 of 4 0.24Down
Larval tubule73 44 of 4 0.60Down
Larval hindgut53 24 of 4 0.41Down
Larval fat body68 74 of 4 0.50Down
Larval trachea97 64 of 4 0.74Down
Larval carcass44 14 of 4 0.34Down
S2 cells (growing)121 14 of 4 0.92None
Whole fly131 54 of 4

Looking for FBgn0026737. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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