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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026754 through 18771 annotations produced 1 hits



UDP-glycosyltransferase 37c1 (Ugt37c1):

Annotation Number : CG8652
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026754
Gbrowse : chr2R:12730934-12732392 (-) // 100.0 //
Probeset : 1639299_at
Accessions : protein= NP_525007;, nucleotide= NM_080268;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0026754.
Homophila reports that CG8652 is a close match (1e-48) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.90None
Head3 ± 10 of 4 1.00None
Eye1 ± 00 of 4 0.43None
Thoracicoabdominal ganglion2 ± 00 of 4 0.70None
Salivary gland9 ± 30 of 4 3.02None
Crop2 ± 10 of 4 0.70None
Midgut3 ± 10 of 4 1.10None
Tubule2 ± 00 of 4 0.70None
Hindgut1 ± 00 of 4 0.40None
Heart5 ± 11 of 4 1.69None
Fat body18 ± 30 of 4 5.76Up
Ovary2 ± 10 of 4 0.80None
Testis4 ± 10 of 4 1.50None
Male accessory glands6 ± 10 of 4 1.90None
Virgin spermatheca16 ± 10 of 4 5.03Up
Mated spermatheca20 ± 30 of 4 6.54Up
Adult carcass6 ± 20 of 4 2.00None
Larval CNS3 ± 20 of 4 1.16None
Larval Salivary gland9 ± 20 of 4 3.02None
Larval midgut2 ± 10 of 4 0.89None
Larval tubule3 ± 10 of 4 1.00None
Larval hindgut5 ± 20 of 4 1.68None
Larval fat body2 ± 10 of 4 0.70None
Larval trachea2 ± 10 of 4 0.63None
Larval carcass83 ± 264 of 426.40None
S2 cells (growing)0 ± 00 of 4 0.28None
Whole fly3 ± 10 of 4

Looking for FBgn0026754. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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