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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026760 through 18771 annotations produced 1 hits



Tehao (Tehao):

Annotation Number : CG7121
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026760
Gbrowse : chr2L:13435636-13440955 (+) // 100.0 //
Probeset : 1630587_at
Accessions : protein= NP_477438;, nucleotide= NM_058090;
Pathway : 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotat
Interpro : 0004888 // transmembrane receptor activity // inferred from electronic annotation /// 0004888 // transmembrane receptor
FlyMine data for FBgn0026760.
Homophila reports that CG7121 is a close match (1e-11) to human gene ALS;IGFALS (NP_004961), a gene associated with Acid-labile subunit, deficiency of (3).
TRiP has 1 RNAi stocks for FBgn0026760 available for purchase.
VDRC has 5 RNAi stocks for FBgn0026760 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.90None
Head2 10 of 4 0.90None
Eye1 00 of 4 0.54None
Thoracicoabdominal ganglion3 10 of 4 1.50None
Salivary gland3 10 of 4 1.43None
Crop1 00 of 4 0.70None
Midgut3 10 of 4 1.50None
Tubule2 10 of 4 1.00None
Hindgut5 10 of 4 2.10None
Heart3 10 of 4 1.48None
Fat body5 40 of 4 2.16None
Ovary0 00 of 4 0.20None
Testis1 00 of 4 0.60None
Male accessory glands3 20 of 4 1.40None
Virgin spermatheca1 00 of 4 0.50None
Mated spermatheca4 20 of 4 1.87None
Adult carcass1 00 of 4 0.70None
Larval CNS1 00 of 4 0.51None
Larval Salivary gland2 10 of 4 1.05None
Larval midgut2 00 of 4 0.86None
Larval tubule2 00 of 4 0.80None
Larval hindgut3 00 of 4 1.19None
Larval fat body2 00 of 4 0.90None
Larval trachea2 10 of 4 0.86None
Larval carcass1 00 of 4 0.46None
S2 cells (growing)0 00 of 4 0.21None
Whole fly2 10 of 4

Looking for FBgn0026760. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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