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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026761 through 18771 annotations produced 1 hits



Hsp90-related protein (Trap1):

Annotation Number : CG3152
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026761
Gbrowse : chr2R:2521151-2523767 (-) // 100.0 //
Probeset : 1634173_at
Accessions : protein= NP_477439;, nucleotide= NM_058091;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay
Interpro : 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from e
FlyMine data for FBgn0026761.
VDRC has 1 RNAi stocks for FBgn0026761 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain237 ± 44 of 4 1.60Up
Head142 ± 44 of 4 1.00None
Eye170 ± 124 of 4 1.16None
Thoracicoabdominal ganglion408 ± 214 of 4 2.80Up
Salivary gland194 ± 123 of 4 1.32Up
Crop125 ± 24 of 4 0.90Down
Midgut108 ± 14 of 4 0.70Down
Tubule238 ± 24 of 4 1.60Up
Hindgut163 ± 94 of 4 1.10None
Heart192 ± 84 of 4 1.31Up
Fat body160 ± 94 of 4 1.09None
Ovary201 ± 24 of 4 1.40Up
Testis486 ± 144 of 4 3.30Up
Male accessory glands120 ± 134 of 4 0.80None
Virgin spermatheca179 ± 124 of 4 1.22None
Mated spermatheca190 ± 94 of 4 1.29Up
Adult carcass177 ± 44 of 4 1.20Up
Larval CNS163 ± 154 of 4 1.11None
Larval Salivary gland197 ± 74 of 4 1.34Up
Larval midgut123 ± 84 of 4 0.84None
Larval tubule95 ± 54 of 4 0.70Down
Larval hindgut265 ± 74 of 4 1.81Up
Larval fat body113 ± 254 of 4 0.80None
Larval trachea200 ± 184 of 4 1.37Up
Larval carcass167 ± 164 of 4 1.14None
S2 cells (growing)237 ± 44 of 4 1.62Up
Whole fly147 ± 44 of 4

Looking for FBgn0026761. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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