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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0026873 through 18771 annotations produced 1 hits



Mediator complex subunit 18 (MED18):

Annotation Number : CG14802
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026873
Gbrowse : chrX:1759941-1760917 (+) // 100.0 //
Probeset : 1638834_a_at
Accessions : protein= NP_001138145; /// NP_569948;, nucleotide= NM_001144673; /// NM_130592;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016455 // RNA polymerase II transcription mediator
FlyMine data for FBgn0026873.
BioGrid reports that CG14802 interacts with CG18780 .
VDRC has 5 RNAi stocks for FBgn0026873 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain140 ± 24 of 4 0.80Down
Head125 ± 64 of 4 0.70Down
Eye150 ± 54 of 4 0.83Down
Thoracicoabdominal ganglion152 ± 64 of 4 0.80Down
Salivary gland126 ± 154 of 4 0.70Down
Crop191 ± 94 of 4 1.10None
Midgut97 ± 74 of 4 0.50Down
Tubule91 ± 24 of 4 0.50Down
Hindgut85 ± 44 of 4 0.50Down
Heart124 ± 44 of 4 0.69Down
Fat body119 ± 164 of 4 0.66Down
Ovary334 ± 94 of 4 1.90Up
Testis120 ± 64 of 4 0.70Down
Male accessory glands226 ± 144 of 4 1.30Up
Virgin spermatheca243 ± 74 of 4 1.35Up
Mated spermatheca278 ± 114 of 4 1.54Up
Adult carcass128 ± 74 of 4 0.70Down
Larval CNS272 ± 164 of 4 1.51Up
Larval Salivary gland229 ± 164 of 4 1.27Up
Larval midgut69 ± 24 of 4 0.38Down
Larval tubule122 ± 44 of 4 0.70Down
Larval hindgut86 ± 44 of 4 0.48Down
Larval fat body168 ± 64 of 4 0.90None
Larval trachea139 ± 64 of 4 0.77Down
Larval carcass137 ± 64 of 4 0.76Down
S2 cells (growing)278 ± 144 of 4 1.54Up
Whole fly180 ± 74 of 4

Looking for FBgn0026873. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime