FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027054 through 18771 annotations produced 1 hits

COP9 signalosome subunit 4 (CSN4):

Annotation Number : CG8725
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027054
Gbrowse : chr2R:3859679-3861606 (+) // 100.0 //
Probeset : 1638270_at
Accessions : protein= NP_001163080; /// NP_477444;, nucleotide= NM_001169609; /// NM_058096;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotatio
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0027054.
BioGrid reports that CG8725 interacts with CG8825 CG8907 CG8977 CG9917 CG9938 .
TRiP has 1 RNAi stocks for FBgn0027054 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027054 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	160 ± 4	4 of 4	0.60	Down
Head	145 ± 7	4 of 4	0.60	Down
Eye	186 ± 3	4 of 4	0.71	Down
Thoracicoabdominal ganglion	176 ± 8	4 of 4	0.70	Down
Salivary gland	303 ± 15	4 of 4	1.16	None
Crop	263 ± 3	4 of 4	1.00	None
Midgut	190 ± 3	4 of 4	0.70	Down
Tubule	243 ± 6	4 of 4	0.90	Down
Hindgut	205 ± 4	4 of 4	0.80	Down
Heart	262 ± 12	4 of 4	1.00	None
Fat body	279 ± 13	4 of 4	1.07	None
Ovary	465 ± 7	4 of 4	1.80	Up
Testis	224 ± 7	4 of 4	0.90	Down
Male accessory glands	301 ± 9	4 of 4	1.10	Up
Virgin spermatheca	175 ± 15	4 of 4	0.67	Down
Mated spermatheca	169 ± 10	4 of 4	0.65	Down
Adult carcass	208 ± 23	4 of 4	0.80	None
Larval CNS	497 ± 17	4 of 4	1.90	Up
Larval Salivary gland	383 ± 10	4 of 4	1.46	Up
Larval midgut	225 ± 14	4 of 4	0.86	None
Larval tubule	482 ± 4	4 of 4	1.80	Up
Larval hindgut	343 ± 15	4 of 4	1.31	Up
Larval fat body	318 ± 16	4 of 4	1.20	Up
Larval trachea	476 ± 10	4 of 4	1.82	Up
Larval carcass	422 ± 33	4 of 4	1.61	Up
S2 cells (growing)	242 ± 4	4 of 4	0.93	None
Whole fly	262 ± 10	4 of 4

Looking for FBgn0027054. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720