FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027066 through 18771 annotations produced 2 hits

/// Eb1 (CR40354 /// Eb1):

Annotation Number : CG40354
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027066 /// FBgn0058354
Gbrowse : chr3LHet:687536-688161 (+) // 100.0 // /// chr2R:2640168-2642313 (+) // 94.04 //
Probeset : 1626214_s_at
Accessions : protein= NP_001015225; /// NP_001015226; /// NP_610233; /// NP_724495; /// NP_724496; /// NP_724497; /// NP_995752;, nucleotide= NM_001015225; /// NM_001015226; /// NM_136389; /// NM_165487; /// NM_165488; /// NM_165489; /// NM_206030;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005875
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from ele
FlyMine data for FBgn0027066 /// FBgn0058354.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	117 ± 1	4 of 4	1.10	None
Head	65 ± 8	4 of 4	0.60	Down
Eye	50 ± 4	4 of 4	0.45	Down
Thoracicoabdominal ganglion	64 ± 8	4 of 4	0.60	Down
Salivary gland	25 ± 6	2 of 4	0.23	Down
Crop	139 ± 12	4 of 4	1.30	None
Midgut	47 ± 1	4 of 4	0.40	Down
Tubule	9 ± 0	0 of 4	0.10	Down
Hindgut	93 ± 4	4 of 4	0.80	None
Heart	32 ± 3	4 of 4	0.29	Down
Fat body	23 ± 7	3 of 4	0.21	Down
Ovary	159 ± 6	4 of 4	1.40	Up
Testis	382 ± 29	4 of 4	3.40	Up
Male accessory glands	37 ± 5	0 of 4	0.30	Down
Virgin spermatheca	5 ± 1	0 of 4	0.05	Down
Mated spermatheca	6 ± 1	0 of 4	0.06	Down
Adult carcass	36 ± 3	2 of 4	0.30	Down
Larval CNS	156 ± 21	4 of 4	1.41	Up
Larval Salivary gland	140 ± 19	4 of 4	1.27	None
Larval midgut	22 ± 3	0 of 4	0.20	Down
Larval tubule	83 ± 7	4 of 4	0.70	None
Larval hindgut	77 ± 2	4 of 4	0.69	Down
Larval fat body	215 ± 17	4 of 4	1.90	Up
Larval trachea	85 ± 12	4 of 4	0.77	None
Larval carcass	129 ± 24	4 of 4	1.17	None
S2 cells (growing)	387 ± 13	4 of 4	3.49	Up
Whole fly	111 ± 9	4 of 4

Eb1 (Eb1):

Annotation Number : CG3265
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027066
Gbrowse : chr2R:2636738-2643544 (+) // 100.0 //
Probeset : 1626663_s_at
Accessions : protein= NP_610233; /// NP_724495; /// NP_724496; /// NP_724497; /// NP_995752;, nucleotide= NM_136389; /// NM_165487; /// NM_165488; /// NM_165489; /// NM_206030;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005874 // microtubule // inferred from direct assay /// 0005875
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from ele
FlyMine data for FBgn0027066.
BDGP gene expression has embryonic in situ data for Eb1: 19 pix of staining in 5 body parts.
BioGrid reports that CG3265 interacts with CG9928 .
TRiP has 3 RNAi stocks for FBgn0027066 available for purchase.
VDRC has 1 RNAi stocks for FBgn0027066 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	777 ± 28	4 of 4	1.10	None
Head	634 ± 36	4 of 4	0.90	None
Eye	652 ± 16	4 of 4	0.96	None
Thoracicoabdominal ganglion	838 ± 18	4 of 4	1.20	None
Salivary gland	397 ± 27	4 of 4	0.59	Down
Crop	1079 ± 23	4 of 4	1.60	Up
Midgut	480 ± 14	4 of 4	0.70	Down
Tubule	565 ± 19	4 of 4	0.80	Down
Hindgut	658 ± 23	4 of 4	1.00	None
Heart	448 ± 27	4 of 4	0.66	Down
Fat body	489 ± 34	4 of 4	0.72	Down
Ovary	997 ± 16	4 of 4	1.50	Up
Testis	346 ± 23	4 of 4	0.50	Down
Male accessory glands	498 ± 10	4 of 4	0.70	None
Virgin spermatheca	548 ± 38	4 of 4	0.81	None
Mated spermatheca	588 ± 32	4 of 4	0.87	None
Adult carcass	388 ± 2	4 of 4	0.60	Down
Larval CNS	1353 ± 105	4 of 4	2.00	Up
Larval Salivary gland	1579 ± 61	4 of 4	2.34	Up
Larval midgut	577 ± 15	4 of 4	0.85	None
Larval tubule	715 ± 27	4 of 4	1.10	None
Larval hindgut	1328 ± 11	4 of 4	1.96	Up
Larval fat body	1341 ± 43	4 of 4	2.00	Up
Larval trachea	975 ± 55	4 of 4	1.44	Up
Larval carcass	1504 ± 73	4 of 4	2.22	Up
S2 cells (growing)	1550 ± 23	4 of 4	2.29	Up
Whole fly	676 ± 57	4 of 4

Looking for FBgn0027066. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720