FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027073 through 18771 annotations produced 1 hits

/// (CG4302 /// DsecCG4302):

Annotation Number : CG4302
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027073
Gbrowse : chr2R:17100382-17102473 (-) // 100.0 //
Probeset : 1630066_at
Accessions : protein= NP_611563;, nucleotide= NM_137719;
Interpro : "0005515 // protein binding // inferred from physical interaction /// 0015020 // glucuronosyltransferase activity // inf
FlyMine data for FBgn0027073.
Homophila reports that CG4302 is a close match (3e-55) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
BioGrid reports that CG4302 interacts with CG8773 CG6998 .
VDRC has 2 RNAi stocks for FBgn0027073 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	230 ± 7	4 of 4	2.30	Up
Head	318 ± 14	4 of 4	3.20	Up
Eye	133 ± 15	4 of 4	1.36	None
Thoracicoabdominal ganglion	331 ± 4	4 of 4	3.40	Up
Salivary gland	17 ± 2	0 of 4	0.18	Down
Crop	58 ± 1	4 of 4	0.60	Down
Midgut	28 ± 2	4 of 4	0.30	Down
Tubule	969 ± 14	4 of 4	9.90	Up
Hindgut	47 ± 3	4 of 4	0.50	Down
Heart	249 ± 10	4 of 4	2.54	Up
Fat body	771 ± 84	4 of 4	7.85	Up
Ovary	3 ± 1	0 of 4	0.00	Down
Testis	4 ± 1	0 of 4	0.00	Down
Male accessory glands	15 ± 4	2 of 4	0.20	Down
Virgin spermatheca	1904 ± 41	4 of 4	19.37	Up
Mated spermatheca	1566 ± 80	4 of 4	15.93	Up
Adult carcass	393 ± 34	4 of 4	4.00	Up
Larval CNS	57 ± 12	4 of 4	0.59	Down
Larval Salivary gland	9 ± 2	1 of 4	0.09	Down
Larval midgut	113 ± 14	4 of 4	1.15	None
Larval tubule	76 ± 5	4 of 4	0.80	None
Larval hindgut	19 ± 3	4 of 4	0.20	Down
Larval fat body	56 ± 8	4 of 4	0.60	Down
Larval trachea	12 ± 4	3 of 4	0.13	Down
Larval carcass	15 ± 1	3 of 4	0.16	Down
S2 cells (growing)	5 ± 0	0 of 4	0.05	Down
Whole fly	98 ± 7	4 of 4

Looking for FBgn0027073. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720