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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027073 through 18771 annotations produced 1 hits



/// (CG4302 /// DsecCG4302):

Annotation Number : CG4302
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027073
Gbrowse : chr2R:17100382-17102473 (-) // 100.0 //
Probeset : 1630066_at
Accessions : protein= NP_611563;, nucleotide= NM_137719;
Interpro : "0005515 // protein binding // inferred from physical interaction /// 0015020 // glucuronosyltransferase activity // inf
FlyMine data for FBgn0027073.
Homophila reports that CG4302 is a close match (3e-55) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
BioGrid reports that CG4302 interacts with CG8773 CG6998 .
VDRC has 2 RNAi stocks for FBgn0027073 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain230 74 of 4 2.30Up
Head318 144 of 4 3.20Up
Eye133 154 of 4 1.36None
Thoracicoabdominal ganglion331 44 of 4 3.40Up
Salivary gland17 20 of 4 0.18Down
Crop58 14 of 4 0.60Down
Midgut28 24 of 4 0.30Down
Tubule969 144 of 4 9.90Up
Hindgut47 34 of 4 0.50Down
Heart249 104 of 4 2.54Up
Fat body771 844 of 4 7.85Up
Ovary3 10 of 4 0.00Down
Testis4 10 of 4 0.00Down
Male accessory glands15 42 of 4 0.20Down
Virgin spermatheca1904 414 of 419.37Up
Mated spermatheca1566 804 of 415.93Up
Adult carcass393 344 of 4 4.00Up
Larval CNS57 124 of 4 0.59Down
Larval Salivary gland9 21 of 4 0.09Down
Larval midgut113 144 of 4 1.15None
Larval tubule76 54 of 4 0.80None
Larval hindgut19 34 of 4 0.20Down
Larval fat body56 84 of 4 0.60Down
Larval trachea12 43 of 4 0.13Down
Larval carcass15 13 of 4 0.16Down
S2 cells (growing)5 00 of 4 0.05Down
Whole fly98 74 of 4

Looking for FBgn0027073. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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