Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027287 through 18771 annotations produced 1 hits



lethal (1) G0168 (Gmap):

Annotation Number : CG33206
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027287
Gbrowse : chrX:15380954-15404822 (+) // 100.0 //
Probeset : 1627550_a_at
Accessions : protein= NP_788907; /// NP_788908;, nucleotide= NM_176734; /// NM_176735;
Pathway : 0005801 // cis-Golgi network // inferred from direct assay
FlyMine data for FBgn0027287.
VDRC has 4 RNAi stocks for FBgn0027287 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain49 ± 14 of 4 0.80None
Head40 ± 114 of 4 0.70None
Eye37 ± 14 of 4 0.61None
Thoracicoabdominal ganglion56 ± 34 of 4 0.90None
Salivary gland919 ± 404 of 414.92Up
Crop88 ± 14 of 4 1.40None
Midgut129 ± 54 of 4 2.10Up
Tubule102 ± 84 of 4 1.70Up
Hindgut169 ± 104 of 4 2.80Up
Heart45 ± 74 of 4 0.74None
Fat body46 ± 54 of 4 0.76None
Ovary82 ± 24 of 4 1.30None
Testis63 ± 34 of 4 1.00None
Male accessory glands1336 ± 614 of 421.70Up
Virgin spermatheca396 ± 424 of 4 6.44Up
Mated spermatheca596 ± 584 of 4 9.68Up
Adult carcass52 ± 34 of 4 0.90None
Larval CNS44 ± 54 of 4 0.72None
Larval Salivary gland933 ± 1034 of 415.14Up
Larval midgut223 ± 354 of 4 3.63Up
Larval tubule513 ± 124 of 4 8.30Up
Larval hindgut259 ± 394 of 4 4.22Up
Larval fat body55 ± 74 of 4 0.90None
Larval trachea56 ± 74 of 4 0.91None
Larval carcass39 ± 31 of 4 0.64None
S2 cells (growing)180 ± 124 of 4 2.93Up
Whole fly61 ± 104 of 4

Looking for FBgn0027287. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime