Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027378 through 18771 annotations produced 1 hits



MRG15 (MRG15):

Annotation Number : CG6363
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027378
Gbrowse : chr3R:11102161-11103831 (-) // 100.0 //
Probeset : 1626620_at
Accessions : protein= NP_650442;, nucleotide= NM_142185;
Pathway : 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotatio
Interpro : 0003682 // chromatin binding // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity //
FlyMine data for FBgn0027378.
BDGP gene expression has embryonic in situ data for MRG15: 11 pix of staining in 7 body parts.
BioGrid reports that CG6363 interacts with CG7109 CG7323 .
TRiP has 2 RNAi stocks for FBgn0027378 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027378 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain133 24 of 4 0.90Down
Head99 54 of 4 0.70Down
Eye103 34 of 4 0.70Down
Thoracicoabdominal ganglion106 24 of 4 0.70Down
Salivary gland97 74 of 4 0.65Down
Crop113 24 of 4 0.80Down
Midgut99 24 of 4 0.70Down
Tubule104 44 of 4 0.70Down
Hindgut109 34 of 4 0.70Down
Heart91 24 of 4 0.62Down
Fat body93 84 of 4 0.63Down
Ovary238 64 of 4 1.60Up
Testis42 14 of 4 0.30Down
Male accessory glands128 14 of 4 0.90Down
Virgin spermatheca112 54 of 4 0.75Down
Mated spermatheca135 54 of 4 0.91None
Adult carcass114 64 of 4 0.80Down
Larval CNS223 74 of 4 1.50Up
Larval Salivary gland163 64 of 4 1.10None
Larval midgut87 44 of 4 0.58Down
Larval tubule116 34 of 4 0.80Down
Larval hindgut115 24 of 4 0.77Down
Larval fat body110 64 of 4 0.70Down
Larval trachea173 84 of 4 1.16Up
Larval carcass139 24 of 4 0.93None
S2 cells (growing)170 74 of 4 1.14None
Whole fly149 44 of 4

Looking for FBgn0027378. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime