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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027453 through 18771 annotations produced 1 hits



DNZDHHC/NEW1 zinc finger protein 11 (Dnz1):

Annotation Number : CG6627
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027453
Gbrowse : chr2L:10854432-10856669 (-) // 100.0 //
Probeset : 1634625_at
Accessions : protein= NP_477449;, nucleotide= NM_058101;
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from ele
FlyMine data for FBgn0027453.
Homophila reports that CG6627 is a close match (1e-17) to human gene (NP_057116), a gene associated with .
VDRC has 3 RNAi stocks for FBgn0027453 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain339 104 of 4 2.40Up
Head298 94 of 4 2.10Up
Eye831 154 of 4 5.96Up
Thoracicoabdominal ganglion226 74 of 4 1.60Up
Salivary gland107 24 of 4 0.77None
Crop160 114 of 4 1.20None
Midgut155 44 of 4 1.10None
Tubule194 44 of 4 1.40Up
Hindgut132 24 of 4 1.00None
Heart279 164 of 4 2.01Up
Fat body82 244 of 4 0.59Down
Ovary279 44 of 4 2.00Up
Testis20 04 of 4 0.10Down
Male accessory glands119 74 of 4 0.90None
Virgin spermatheca133 34 of 4 0.96None
Mated spermatheca150 94 of 4 1.08None
Adult carcass92 14 of 4 0.70Down
Larval CNS426 204 of 4 3.06Up
Larval Salivary gland151 34 of 4 1.09None
Larval midgut149 64 of 4 1.08None
Larval tubule185 44 of 4 1.30Up
Larval hindgut166 44 of 4 1.19None
Larval fat body66 34 of 4 0.50Down
Larval trachea212 274 of 4 1.53Up
Larval carcass144 64 of 4 1.03None
S2 cells (growing)401 74 of 4 2.88Up
Whole fly139 104 of 4

Looking for FBgn0027453. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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