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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027513 through 18771 annotations produced 1 hits



anastral spindle phenotype 2 (ana2):

Annotation Number : CG8262
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027513
Gbrowse : chr2R:4786227-4787706 (-) // 100.0 //
Probeset : 1629965_at
Accessions : protein= NP_610415;, nucleotide= NM_136571;
Pathway : 0005814 // centriole // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0027513.
BDGP gene expression has embryonic in situ data for BcDNA:LD22033: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0027513 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain15 33 of 4 0.30Down
Head13 11 of 4 0.20Down
Eye9 21 of 4 0.15Down
Thoracicoabdominal ganglion21 32 of 4 0.40Down
Salivary gland7 20 of 4 0.13Down
Crop13 10 of 4 0.20Down
Midgut17 21 of 4 0.30Down
Tubule8 00 of 4 0.10Down
Hindgut14 22 of 4 0.30Down
Heart8 33 of 4 0.14Down
Fat body9 60 of 4 0.15Down
Ovary136 24 of 4 2.30Up
Testis104 44 of 4 1.80Up
Male accessory glands4 20 of 4 0.10Down
Virgin spermatheca8 10 of 4 0.14Down
Mated spermatheca10 20 of 4 0.18Down
Adult carcass16 30 of 4 0.30Down
Larval CNS43 34 of 4 0.74Down
Larval Salivary gland17 20 of 4 0.29Down
Larval midgut16 20 of 4 0.28Down
Larval tubule11 11 of 4 0.20Down
Larval hindgut20 20 of 4 0.34Down
Larval fat body29 82 of 4 0.50Down
Larval trachea27 24 of 4 0.46Down
Larval carcass19 20 of 4 0.33Down
S2 cells (growing)62 14 of 4 1.06None
Whole fly58 44 of 4

Looking for FBgn0027513. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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