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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027532 through 18771 annotations produced 1 hits



/// /// (CG7139 /// DmojCG7139 /// DvirCG7139):

Annotation Number : CG7139
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027532
Gbrowse : chr3L:22060363-22064954 (-) // 100.0 //
Probeset : 1626106_a_at
Accessions : protein= NP_649378; /// NP_730707;, nucleotide= NM_141121; /// NM_168947;
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0027532.
BioGrid reports that CG7139 interacts with CG9214 CG7352 .
VDRC has 2 RNAi stocks for FBgn0027532 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain163 24 of 4 0.80Down
Head162 44 of 4 0.80Down
Eye149 44 of 4 0.75Down
Thoracicoabdominal ganglion149 04 of 4 0.80Down
Salivary gland317 314 of 4 1.60Up
Crop291 34 of 4 1.50Up
Midgut236 44 of 4 1.20Up
Tubule350 124 of 4 1.80Up
Hindgut157 44 of 4 0.80Down
Heart115 44 of 4 0.58Down
Fat body279 314 of 4 1.41Up
Ovary434 114 of 4 2.20Up
Testis62 24 of 4 0.30Down
Male accessory glands258 134 of 4 1.30Up
Virgin spermatheca340 154 of 4 1.72Up
Mated spermatheca341 114 of 4 1.72Up
Adult carcass161 134 of 4 0.80None
Larval CNS234 84 of 4 1.18Up
Larval Salivary gland408 134 of 4 2.06Up
Larval midgut191 134 of 4 0.97None
Larval tubule244 134 of 4 1.20Up
Larval hindgut136 84 of 4 0.69Down
Larval fat body213 144 of 4 1.10None
Larval trachea168 184 of 4 0.85None
Larval carcass144 144 of 4 0.73Down
S2 cells (growing)275 24 of 4 1.39Up
Whole fly198 84 of 4

Looking for FBgn0027532. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime